RNA–Protein interactions for RNA: ENST00000464256.1

PAXBP1-206, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best)

Gene PAXBP1, Length 1,692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-206ENST00000464256 VAMP1P23763 118 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 ANKRD55Q3KP44 614 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 TMEM128Q5BJH2 165 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 SLC25A42Q86VD7 318 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 CADM3Q8N126 398 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 TTC9CQ8N5M4 171 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 TMEM56Q96MV1 263 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 TMEM56-RWDD3S4R434 201 aa19.67■□□□□ 0.74
PAXBP1-206ENST00000464256 B3GALNT1O75752 331 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 WT1-ASQ06250 92 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 LYZL2Q7Z4W2 148 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 OR4A16Q8NH70 328 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 RAX2Q96IS3 184 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 TMEM68Q96MH6 324 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 NDUFA4L2Q9NRX3 87 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 KCNIP3Q9Y2W7 256 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 FBN3Q75N90 2809 aa19.66■□□□□ 0.74
PAXBP1-206ENST00000464256 SLC6A1P30531 599 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 OR1L8Q8NGR8 309 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 UBE2E2Q96LR5 201 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 OR4F17Q8NGA8 305 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 RNASE11Q8TAA1 199 aaKnown RBP19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 GPR146Q96CH1 333 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 OR4F4Q96R69 305 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 TSC22D3Q99576 134 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 C20orf85Q9H1P6 137 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 PRNDQ9UKY0 176 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 DMRT1Q9Y5R6 373 aa19.65■□□□□ 0.74
PAXBP1-206ENST00000464256 TRAV6A0A075B6T7 132 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 FGF2P09038 288 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 TRAPPC2P0DI81 140 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 TRAPPC2BP0DI82 140 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 CTRB1P17538 263 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 PSMB6P28072 239 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 CTRB2Q6GPI1 263 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 C4orf3Q8WVX3 66 aa19.64■□□□□ 0.73
PAXBP1-206ENST00000464256 I3L521 148 aa19.63■□□□□ 0.73
PAXBP1-206ENST00000464256 ASAH1Q13510 395 aa19.63■□□□□ 0.73
PAXBP1-206ENST00000464256 RRNAD1Q96FB5 475 aaKnown RBP19.63■□□□□ 0.73
PAXBP1-206ENST00000464256 FANCD2OSQ96PS1 177 aa19.63■□□□□ 0.73
PAXBP1-206ENST00000464256 NPIPB5A8MRT5 1133 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 ST8SIA3O43173 380 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 SFT2D2O95562 160 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 TCRBP04435 133 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 SLA2Q9H6Q3 261 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 OR2J3O76001 311 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 NXPH3O95157 252 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 CRYGCP07315 174 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 OR13C7P0DN81 318 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 OR52B4Q8NGK2 314 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 NUDT15Q9NV35 164 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 CACNG5Q9UF02 275 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 ZNF257Q9Y2Q1 563 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 S4R3C0 116 aa19.62■□□□□ 0.73
PAXBP1-206ENST00000464256 TRBV9A0A0B4J1U6 114 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 C9orf170A2RU37 121 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 H3BUA1 57 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 OR4E1P0C645 316 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 RHOGP84095 191 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 C11orf87Q6NUJ2 197 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 OR5B3Q8NH48 314 aa19.61■□□□□ 0.73
PAXBP1-206ENST00000464256 PF4P02776 101 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 ANXA3P12429 323 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 MFAP2P55001 183 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 DHRS2Q13268 280 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 NMSQ5H8A3 153 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 OR11H1Q8NG94 326 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 IL22RA2Q969J5 263 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 P2RX4Q99571 388 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 DNAH3Q8TD57 4116 aa19.6■□□□□ 0.73
PAXBP1-206ENST00000464256 CCL24O00175 119 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 ATG12O94817 140 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 TRBV12-3P01733 135 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 HLA-AP01891 365 aaKnown RBP19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 RAB25P57735 213 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 UBE2MP61081 183 aaKnown RBP19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 HSPE1P61604 102 aaKnown RBP19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 ZNF429Q86V71 674 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 MRPL41Q8IXM3 137 aaKnown RBP19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 LGI3Q8N145 548 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 LSM10Q969L4 123 aaKnown RBP19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 FKBP11Q9NYL4 201 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 A0A0B4J2A0 478 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 FAM240BA0A1B0GVZ2 78 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 NDUFB8O95169 186 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 BRI3O95415 125 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 PRCDQ00LT1 54 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 SHPKQ9UHJ6 478 aa19.59■□□□□ 0.73
PAXBP1-206ENST00000464256 IGHV4OR15-8A0A075B7B6 117 aa19.58■□□□□ 0.72
PAXBP1-206ENST00000464256 A0A087WW49 117 aa19.58■□□□□ 0.72
PAXBP1-206ENST00000464256 LGALS1P09382 135 aaKnown RBP19.58■□□□□ 0.72
PAXBP1-206ENST00000464256 MECP2P51608 486 aaKnown RBP19.58■□□□□ 0.72
PAXBP1-206ENST00000464256 LINC00482Q8N8I6 264 aa19.58■□□□□ 0.72
PAXBP1-206ENST00000464256 IGLV11-55A0A075B6I3 123 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 ANKRD34BA5PLL1 514 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 IGHV3-23P01764 117 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 C4orf46Q504U0 113 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 LYG2Q86SG7 212 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 FAM219AQ8IW50 185 aa19.57■□□□□ 0.72
PAXBP1-206ENST00000464256 MEGF8Q7Z7M0 2845 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms