RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 OR1D4P47884 311 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 EMDP50402 254 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 LGALS4P56470 323 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF121P58317 390 aaPredicted RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 RPL8P62917 257 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 QRFPP83859 136 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 VWC2Q2TAL6 325 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ASPHD1Q5U4P2 390 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM25Q86YD3 366 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TTC9CQ8N5M4 171 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR5AN1Q8NGI8 311 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR10G7Q8NGN6 311 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR1L3Q8NH93 324 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR51E1Q8TCB6 317 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 LSM10Q969L4 123 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 KIR2DL4Q99706 377 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SPIN2AQ99865 258 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 VGLL1Q99990 258 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SPIN2BQ9BPZ2 258 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 APOOQ9BUR5 198 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 GNB1LQ9BYB4 327 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 GCM1Q9NP62 436 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 C19orf73Q9NVV2 129 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ANXA10Q9UJ72 324 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SCN2AQ99250 2005 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 C3orf85A0A1B0GTC6 90 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SCO2A0A1W2PP80 73 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 A0A1W2PRE2 83 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 FOXI3A8MTJ6 420 aaPredicted RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM14DPA8MWL7 114 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SYS1-DBNDD2H3BUS1 97 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SMAD7O15105 426 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 TBL1XO60907 577 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 CT45A10P0DMU9 189 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 GCSHP23434 173 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 G6PCP35575 357 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 P2RY2P41231 377 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 PSG7Q13046 419 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 EIF3IQ13347 325 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 DIAPH2-AS1Q14236 149 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TIMM23BQ5SRD1 257 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 MBNL2Q5VZF2 373 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 TMEM136Q6ZRR5 245 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 PRSS41Q7RTY9 318 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ZDHHC23Q8IYP9 409 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ZNF436-AS1Q8NC38 126 aaPredicted RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 OR4A16Q8NH70 328 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 CDIP1Q9H305 208 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 PHF3Q92576 2039 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 LAMA3Q16787 3333 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 CEP290O15078 2479 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OBSL1O75147 1896 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 NUP210LQ5VU65 1888 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TRBV20OR9-2A0A075B6H5 130 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TRAV36DV7A0A075B6V5 113 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TRAV5A0A0B4J249 113 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 A0A1W2PQM1 296 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SMIM9A6NGZ8 99 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TNFRSF6BO95407 300 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 CGAP01215 116 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 REG1AP05451 166 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 RNASE1P07998 156 aaKnown RBP3□□□□□ -1.93
COL8A1-205ENST00000463753 SMIM13P0DJ93 91 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ECI1P42126 302 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 KIR2DS4P43632 304 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 DPTQ07507 201 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ARL16Q0P5N6 197 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 LY6DQ14210 128 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 TTC32Q5I0X7 151 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 SPANXN5Q5MJ07 72 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 PARM1Q6UWI2 310 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 FAM159AQ6UWV7 190 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ASCL4Q6XD76 172 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 GATSQ8NAP1 163 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR1L8Q8NGR8 309 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 C1QTNF5Q9BXJ0 243 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 FAM206AQ9NX38 181 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 OR1A2Q9Y585 309 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 MPC1Q9Y5U8 109 aa3□□□□□ -1.93
COL8A1-205ENST00000463753 ZDBF2Q9HCK1 2354 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 SZT2Q5T011 3432 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CTXND1A0A1B0GTU2 59 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 A0A1W2PRD5 423 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 A0A1W2PRF3 423 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 A0A1W2PRM7 423 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 F8W1H4 67 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 H3BS24 57 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 DHHO43323 396 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 LEPROTL1O95214 131 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CLDN14O95500 239 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CXorf1O96002 111 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 IGHV3-7P01780 117 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 MT-ND6P03923 174 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 NHLRC4P0CG21 123 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 PSG2P11465 335 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CD38P28907 300 aa2.99□□□□□ -1.93
COL8A1-205ENST00000463753 KIR2DL1P43626 348 aaPredicted RBP2.99□□□□□ -1.93
COL8A1-205ENST00000463753 CAMPP49913 170 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms