RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 OR10W1Q8NGF6 305 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 OR1S1Q8NH92 325 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 OR2T6Q8NHC8 308 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 WDR89Q96FK6 387 aaPredicted RBP10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 C2orf50Q96LR7 162 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 MED28Q9H204 178 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 MGAT4CQ9UBM8 478 aa10.91□□□□□ -0.66
PHACTR4-203ENST00000463428 C5orf51A6NDU8 294 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 FAM25EA8MYX2 175 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 FAM90A26D6RGX4 464 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 VDAC2P45880 294 aaPredicted RBP10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 SPCS3P61009 180 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 CFHR3Q02985 330 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 TNFRSF9Q07011 255 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 SRSF4Q08170 494 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 OR4F5Q8NH21 305 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 WIPF2Q8TF74 440 aaPredicted RBP10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 FYTTD1Q96QD9 318 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 SRSF8Q9BRL6 282 aaKnown RBP10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 WSB1Q9Y6I7 421 aa10.9□□□□□ -0.66
PHACTR4-203ENST00000463428 ATRQ13535 2644 aa10.9□□□□□ -0.67
PHACTR4-203ENST00000463428 TRAV41A0A0B4J266 112 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 TMEM89A2RUT3 159 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 INS-IGF2F8WCM5 200 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 NXPH3O95157 252 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 IFNA17P01571 189 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 MDKP21741 143 aaPredicted RBP10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 WT1-ASQ06250 92 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 SPINK9Q5DT21 86 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 C11orf87Q6NUJ2 197 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 TTC9CQ8N5M4 171 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 ABHD5Q8WTS1 349 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 TMEM68Q96MH6 324 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 CACFD1Q9UGQ2 172 aa10.89□□□□□ -0.67
PHACTR4-203ENST00000463428 CLPSL1A2RUU4 121 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 SOX15O60248 233 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 MBPP02686 304 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 CRYGCP07315 174 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 APELAP0DMC3 54 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 AREGP15514 252 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 NKX2-1P43699 371 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 PROK1P58294 105 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 TMEM267Q0VDI3 215 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 ECSCRQ19T08 205 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 ARSJQ5FYB0 599 aaPredicted RBP10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 UNQ5815/PRO19632Q6UWF5 114 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 CHAC2Q8WUX2 184 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 HINT2Q9BX68 163 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 NMES1Q9C002 83 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 RBKSQ9H477 322 aa10.88□□□□□ -0.67
PHACTR4-203ENST00000463428 A0A1W2PN81 502 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 NPIPB5A8MRT5 1133 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 CTRB1P17538 263 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 CHRNA7P36544 502 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 POLR2GP62487 172 aaKnown RBP eCLIP10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 KLK9Q2XQG4 91 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 HSD17B13Q7Z5P4 300 aaPredicted RBP10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 OR2C3Q8N628 320 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 OR5T1Q8NG75 326 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 MAGT1Q9H0U3 335 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 KLK9Q9UKQ9 250 aa10.87□□□□□ -0.67
PHACTR4-203ENST00000463428 SYNGR2O43760 224 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 IGLV1-40P01703 118 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 IGHG4P01861 327 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 REG1AP05451 166 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 OR13C7P0DN81 318 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 PSMB6P28072 239 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 CYCSP99999 105 aaKnown RBP10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 C19orf35Q6ZS72 473 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 C11orf1Q9H5F2 150 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 PLEKHA3Q9HB20 300 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 RNF114Q9Y508 228 aa10.86□□□□□ -0.67
PHACTR4-203ENST00000463428 A0A1B0GUS0 222 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 PSMB11A5LHX3 300 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 CEBPZOSA8MTT3 80 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 FBXO24O75426 580 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 BRI3O95415 125 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 TMEM50AO95807 157 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 PAX9P55771 341 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 FOXL1Q12952 345 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 RAB32Q13637 225 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 BSXQ3C1V8 233 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 KLHDC1Q8N7A1 406 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 DTD1Q8TEA8 209 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 GON7Q9BXV9 100 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 ZNF436Q9C0F3 470 aaPredicted RBP10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 RCL1Q9Y2P8 373 aaKnown RBP10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 DMRT1Q9Y5R6 373 aa10.85□□□□□ -0.67
PHACTR4-203ENST00000463428 K7EPK0 472 aa10.84□□□□□ -0.67
PHACTR4-203ENST00000463428 MED6O75586 246 aa10.84□□□□□ -0.67
PHACTR4-203ENST00000463428 SCGB1D2O95969 90 aa10.84□□□□□ -0.67
PHACTR4-203ENST00000463428 HOXA1P49639 335 aaPredicted RBP10.84□□□□□ -0.67
PHACTR4-203ENST00000463428 MFAP2P55001 183 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms