RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ANKRD36BP1Q96IX9 119 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 PPP1R2P1Q96PQ5 205 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 C11orf1Q9H5F2 150 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 C9JCJ5 164 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 MRASO14807 208 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 ZNF140P52738 457 aaPredicted RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 ZFP1Q6P2D0 407 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 OR10G2Q8NGC3 310 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 RNASE7Q9H1E1 156 aaKnown RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 PPIP5K1Q6PFW1 1433 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 TANC1Q9C0D5 1861 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 FOCADQ5VW36 1801 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 IGKV1D-37A0A075B6S9 117 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 hADV38S2A0JD32 116 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 H0YJX3 145 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 S1PR2O95136 353 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 FBP1P09467 338 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 ZNF133P52736 654 aaPredicted RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 SNRPD2P62316 118 aaKnown RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 DYNLL1P63167 89 aaKnown RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 C5orf46Q6UWT4 87 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 RNASE6Q93091 150 aaKnown RBP1.8□□□□□ -2.12
SMC4-203ENST00000462668 C19orf12Q9NSK7 152 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 C21orf62Q9NYP8 219 aa1.8□□□□□ -2.12
SMC4-203ENST00000462668 SIP14410 1827 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 KIAA1549LQ6ZVL6 1849 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 GCN1Q92616 2671 aaKnown RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 FREM2Q5SZK8 3169 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF616Q08AN1 781 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 TMEM241Q24JQ0 296 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 C12orf74Q32Q52 190 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ABCA11PQ4W5N1 156 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 LIN52Q52LA3 116 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 FAM172AQ8WUF8 416 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 DIRAS2Q96HU8 199 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 MIXL1Q9H2W2 232 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ANAPC10Q9UM13 185 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 DMXL2Q8TDJ6 3036 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF682O95780 498 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 HLA-DQB1P01920 261 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 MUC1P15941 1255 aaPredicted RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 RPL19P84098 196 aaKnown RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 PRDX4Q13162 271 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 TIFABQ6ZNK6 161 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 TMEM144Q7Z5S9 345 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 SLC51BQ86UW2 128 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 C1orf174Q8IYL3 243 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF382Q96SR6 550 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 SIGMAR1Q99720 223 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 RPS10P5Q9NQ39 176 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 DHCR7Q9UBM7 475 aaKnown RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 AGRNO00468 2067 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF318Q5VUA4 2279 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 BDP1A6H8Y1 2624 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 IGLV4-69A0A075B6H9 119 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 IGLV3-10A0A075B6K4 115 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 IGHV1-69-2A0A0G2JMI3 117 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF850A8MQ14 1090 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 PPP5D1E7EU14 171 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 IL1RNP18510 177 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 MAP2K4P45985 399 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 TNFAIP8L3Q5GJ75 292 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 AMN1Q8IY45 258 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 ABHD14BQ96IU4 210 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 TBL1YQ9BQ87 522 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 GINS3Q9BRX5 216 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 PCBD2Q9H0N5 130 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 PDFQ9HBH1 243 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF230Q9UIE0 474 aaPredicted RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 ATG2BQ96BY7 2078 aa1.79□□□□□ -2.12
SMC4-203ENST00000462668 ZNF106Q9H2Y7 1883 aaKnown RBP1.79□□□□□ -2.12
SMC4-203ENST00000462668 RIC1Q4ADV7 1423 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 SETXQ7Z333 2677 aaKnown RBP1.78□□□□□ -2.12
SMC4-203ENST00000462668 PSMD12O00232 456 aaPredicted RBP1.78□□□□□ -2.12
SMC4-203ENST00000462668 ZNF32P17041 273 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 CA7P43166 264 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 IL15RAQ13261 267 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 C10orf91Q5T1B1 145 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 Q6P435 159 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 SLC22A24Q8N4F4 322 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 APCDD1LQ8NCL9 501 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 LMX1AQ8TE12 382 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 GNPNAT1Q96EK6 184 aaPredicted RBP1.78□□□□□ -2.12
SMC4-203ENST00000462668 SELENOSQ9BQE4 189 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 NDFIP1Q9BT67 221 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 TRIM4Q9C037 500 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 TRABDQ9H4I3 376 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 RWDD2AQ9UIY3 292 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 FBN2P35556 2912 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 NUP210LQ5VU65 1888 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 NDUFB2O95178 105 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 TM2D3Q9BRN9 247 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 TSSK6Q9BXA6 273 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 DOK5Q9P104 306 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 ANKRD36BQ8N2N9 1353 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 UBR5O95071 2799 aaPredicted RBP1.78□□□□□ -2.12
SMC4-203ENST00000462668 A0A1B0GU33 70 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 FUOMA2VDF0 154 aa1.78□□□□□ -2.12
SMC4-203ENST00000462668 IFNA1P01562 189 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms