RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 RBMY1BA6NDE4 496 aaKnown RBP17.11■□□□□ 0.33
PTPN4-207ENST00000460162 RBMY1EA6NEQ0 496 aaKnown RBP17.11■□□□□ 0.33
PTPN4-207ENST00000460162 RBMY1DP0C7P1 496 aaKnown RBP17.11■□□□□ 0.33
PTPN4-207ENST00000460162 PTBP1P26599 531 aaKnown RBP eCLIP17.11■□□□□ 0.33
PTPN4-207ENST00000460162 RFX2P48378 723 aa17.11■□□□□ 0.33
PTPN4-207ENST00000460162 CMTM1Q8IZ96 169 aa17.11■□□□□ 0.33
PTPN4-207ENST00000460162 UXS1Q8NBZ7 420 aa17.11■□□□□ 0.33
PTPN4-207ENST00000460162 FXYD6Q9H0Q3 95 aa17.11■□□□□ 0.33
PTPN4-207ENST00000460162 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
PTPN4-207ENST00000460162 ELLP55199 621 aaPredicted RBP17.1■□□□□ 0.33
PTPN4-207ENST00000460162 UNQ9165/PRO28630Q6UXU0 137 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 CADM3Q8N126 398 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 OR10W1Q8NGF6 305 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 OR1L8Q8NGR8 309 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 VN1R17PQ8TDU5 208 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 FAM110AQ9BQ89 295 aa17.1■□□□□ 0.33
PTPN4-207ENST00000460162 A0A087WXM4 84 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 PMP2P02689 132 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 TRAPPC2P0DI81 140 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 TRAPPC2BP0DI82 140 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 WT1-ASQ06250 92 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 ANKRD55Q3KP44 614 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 PLET1Q6UQ28 207 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 BTNL8Q6UX41 500 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 OR52B4Q8NGK2 314 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 IL17DQ8TAD2 202 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 LSM10Q969L4 123 aaKnown RBP17.09■□□□□ 0.33
PTPN4-207ENST00000460162 DGCR14Q96DF8 476 aaKnown RBP17.09■□□□□ 0.33
PTPN4-207ENST00000460162 UFC1Q9Y3C8 167 aa17.09■□□□□ 0.33
PTPN4-207ENST00000460162 TRAV25A0A0B4J276 109 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 GPR31O00270 319 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 TGOLN2O43493 480 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 TNFAIP8O95379 198 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 SERPINE2P07093 398 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 C8orf88P0DMB2 117 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 OR13C7P0DN81 318 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 RPA2P15927 270 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 PRSS3P35030 304 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 LSM3P62310 102 aaKnown RBP17.08■□□□□ 0.32
PTPN4-207ENST00000460162 TSPAN14Q8NG11 270 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 OR6F1Q8NGZ6 308 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 FCAMRQ8WWV6 532 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 SLC25A46Q96AG3 418 aa17.08■□□□□ 0.32
PTPN4-207ENST00000460162 ZNF436Q9C0F3 470 aaPredicted RBP17.08■□□□□ 0.32
PTPN4-207ENST00000460162 MRPL27Q9P0M9 148 aaKnown RBP17.08■□□□□ 0.32
PTPN4-207ENST00000460162 TEX50A0A1B0GTY4 177 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 SCAF4O95104 1147 aaKnown RBP17.07■□□□□ 0.32
PTPN4-207ENST00000460162 TM4SF20Q53R12 229 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 TMEM190Q8WZ59 177 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 ATP6V0BQ99437 205 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 NDUFA4L2Q9NRX3 87 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 GAR1Q9NY12 217 aaKnown RBP17.07■□□□□ 0.32
PTPN4-207ENST00000460162 F11RQ9Y624 299 aaKnown RBP17.07■□□□□ 0.32
PTPN4-207ENST00000460162 SELENOKQ9Y6D0 94 aa17.07■□□□□ 0.32
PTPN4-207ENST00000460162 KRASP01116 189 aa17.06■□□□□ 0.32
PTPN4-207ENST00000460162 HRH1P35367 487 aa17.06■□□□□ 0.32
PTPN4-207ENST00000460162 LPAR6P43657 344 aa17.06■□□□□ 0.32
PTPN4-207ENST00000460162 BSCL2Q96G97 398 aaPredicted RBP17.06■□□□□ 0.32
PTPN4-207ENST00000460162 SNAPC5O75971 98 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 EIF4EP06730 217 aaKnown RBP17.05■□□□□ 0.32
PTPN4-207ENST00000460162 G6PCP35575 357 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 ZNF585BQ52M93 769 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 SPSB3Q6PJ21 355 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 RBPMS2Q6ZRY4 209 aaKnown RBP17.05■□□□□ 0.32
PTPN4-207ENST00000460162 OR5B3Q8NH48 314 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 GPX8Q8TED1 209 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 CMTM3Q96MX0 182 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 TSC22D3Q99576 134 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 SCPEP1Q9HB40 452 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 FAM212BQ9NTI7 297 aaPredicted RBP17.05■□□□□ 0.32
PTPN4-207ENST00000460162 PRNDQ9UKY0 176 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 OR51B2Q9Y5P1 312 aa17.05■□□□□ 0.32
PTPN4-207ENST00000460162 APOA1P02647 267 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 HLA-DMAP28067 261 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 S100GP29377 79 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 SLC25A24Q6NUK1 477 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 LPCAT3Q6P1A2 487 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 LYSMD2Q8IV50 215 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 OR1L6Q8NGR2 347 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 GGTLC1Q9BX51 225 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 HINT2Q9BX68 163 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 DAZ1Q9NQZ3 744 aaKnown RBP17.04■□□□□ 0.32
PTPN4-207ENST00000460162 FKBP11Q9NYL4 201 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 C21orf62Q9NYP8 219 aa17.04■□□□□ 0.32
PTPN4-207ENST00000460162 DNAH1Q9P2D7 4330 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 IGHV3-35A0A0C4DH35 117 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 OR2T8A6NH00 312 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 TMEM56Q96MV1 263 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 SPAG8Q99932 426 aaPredicted RBP17.03■□□□□ 0.32
PTPN4-207ENST00000460162 C5orf66Q9H5L9 145 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 NSG2Q9Y328 171 aa17.03■□□□□ 0.32
PTPN4-207ENST00000460162 SMIM31A0A1B0GVY4 71 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 C15orf61A6NNL5 157 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 RCVRNP35243 200 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 MFAP2P55001 183 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 TSPAN5P62079 268 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 PHLDA2Q53GA4 152 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 TMEM14BQ9NUH8 114 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 COMMD3Q9UBI1 195 aa17.02■□□□□ 0.32
PTPN4-207ENST00000460162 LOC102724200A0A096LPH7 203 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms