RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 CA2P00918 260 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 MT-ND6P03923 174 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 OR10J4P0C629 311 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 IL3RAP26951 378 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 ERHP84090 104 aaKnown RBP7.27□□□□□ -1.25
HDAC3-202ENST00000459727 IQCJQ1A5X6 159 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 SPINK9Q5DT21 86 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 MIC13Q5XKP0 118 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 VHLLQ6RSH7 139 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF833PQ6ZTB9 187 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 LRP11Q86VZ4 500 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 PDPNQ86YL7 162 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF383Q8NA42 475 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 NECAP1Q8NC96 275 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 PCGF1Q9BSM1 259 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 PARD6AQ9NPB6 346 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 FUT9Q9Y231 359 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 LAMA5O15230 3695 aa7.27□□□□□ -1.25
HDAC3-202ENST00000459727 MAST4O15021 2626 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 TRAV20A0A0B4J274 112 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 C16orf97H3BN30 126 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 OR5G3P0C626 314 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 WT1P19544 449 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ATP5G3P48201 142 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF134P52741 427 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 BPIFB3P59826 476 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 YPEL3P61236 119 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 SELENOTP62341 195 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 HLA-DRB5Q30154 266 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 C4orf17Q53FE4 359 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 TMEM177Q53S58 311 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ARSJQ5FYB0 599 aaPredicted RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 FAM209BQ5JX69 171 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 FAM78BQ5VT40 261 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 WDR73Q6P4I2 378 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 LINC00311Q8N616 119 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 OR1L4Q8NGR5 311 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 GATAD1Q8WUU5 269 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 TNFRSF14Q92956 283 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 TMEM186Q96B77 213 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF714Q96N38 554 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 CHRDL1Q9BU40 450 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 COMMD5Q9GZQ3 224 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 PATZ1Q9HBE1 687 aaKnown RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 IL36BQ9NZH7 164 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 TRAPPC1Q9Y5R8 145 aa7.26□□□□□ -1.25
HDAC3-202ENST00000459727 FLNBO75369 2602 aaKnown RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
HDAC3-202ENST00000459727 MED12LQ86YW9 2145 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 A0A0U1RQK1 487 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 A0A1W2PRE2 83 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF320A2RRD8 509 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 C17orf100A8MU93 164 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 SLC31A2O15432 143 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 AMBPP02760 352 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 MC5RP33032 325 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 NBL1P41271 181 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 GNG4P50150 75 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 UBE2G2P60604 165 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 RANP62826 216 aaKnown RBP7.25□□□□□ -1.25
HDAC3-202ENST00000459727 MSMPQ1L6U9 139 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 TIGITQ495A1 244 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 LRRC10Q5BKY1 277 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 FAM53AQ6NSI3 398 aaPredicted RBP7.25□□□□□ -1.25
HDAC3-202ENST00000459727 TEX38Q6PEX7 206 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 VKORC1L1Q8N0U8 176 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 ABHD12Q8N2K0 398 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 STXBP6Q8NFX7 210 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 OR5AN1Q8NGI8 311 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 OR4C13Q8NGP0 309 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 SGMS2Q8NHU3 365 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF596Q8TC21 504 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 C22orf15Q8WYQ4 148 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 PRDM13Q9H4Q3 707 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 ARID1AO14497 2285 aa7.25□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF407Q9C0G0 2248 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 ESPL1Q14674 2120 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PPIAL4EA0A075B759 164 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 TRBV23-1A0A0A0MS06 115 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 SCO2A0A1W2PP80 73 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PPIAL4DF5H284 164 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 CORTO00230 105 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 ATXN7O15265 892 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 NDUFB3O43676 98 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 FSTL3O95633 263 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 TFF1P04155 84 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 C8orf88P0DMB2 117 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PPIAL4FP0DN26 164 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 NDUFB7P17568 137 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 NPPCP23582 126 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 COMPP49747 757 aaPredicted RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 ZNF137PP52743 207 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 TAS2R60P59551 318 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RPL15P61313 204 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RPS16P62249 146 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RPL31P62899 125 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 RPL8P62917 257 aaKnown RBP7.24□□□□□ -1.25
HDAC3-202ENST00000459727 PAFAH1B2P68402 229 aa7.24□□□□□ -1.25
HDAC3-202ENST00000459727 CD69Q07108 199 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms