RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 OR2F1Q13607 317 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 EXOSC2Q13868 293 aaKnown RBP6.93□□□□□ -1.3
RIF1-208ENST00000457745 CLINT1Q14677 625 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 MMDQ15546 238 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 MLANAQ16655 118 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 DEFB112Q30KQ8 113 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 SPANXN5Q5MJ07 72 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 Q6ZS46 218 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 TMEM217Q8N7C4 229 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 NPBQ8NG41 125 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 OR4A16Q8NH70 328 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 ST8SIA2Q92186 375 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 TAF15Q92804 592 aaKnown RBP eCLIP6.93□□□□□ -1.3
RIF1-208ENST00000457745 MALSU1Q96EH3 234 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 FAM103A1Q9BTL3 118 aaKnown RBP6.93□□□□□ -1.3
RIF1-208ENST00000457745 HINT2Q9BX68 163 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 SH3BGRL3Q9H299 93 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 NDUFA4L2Q9NRX3 87 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 MRPL36Q9P0J6 103 aaKnown RBP6.93□□□□□ -1.3
RIF1-208ENST00000457745 ZNF469Q96JG9 3925 aaPredicted RBP6.93□□□□□ -1.3
RIF1-208ENST00000457745 TLN2Q9Y4G6 2542 aa6.93□□□□□ -1.3
RIF1-208ENST00000457745 OOSP1A8MZH6 123 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RGS13O14921 159 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 NBR2O15453 112 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RBMXL2O75526 392 aaKnown RBP6.92□□□□□ -1.3
RIF1-208ENST00000457745 CA2P00918 260 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 IFNA17P01571 189 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RNASE2P10153 161 aaKnown RBP6.92□□□□□ -1.3
RIF1-208ENST00000457745 EGR2P11161 476 aaPredicted RBP6.92□□□□□ -1.3
RIF1-208ENST00000457745 CEACAM3P40198 252 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 SPCS3P61009 180 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 GNB1P62873 340 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RPL8P62917 257 aaKnown RBP6.92□□□□□ -1.3
RIF1-208ENST00000457745 VAMP2P63027 116 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RUNX1Q01196 453 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 DEFA5Q01523 94 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 HES1Q14469 280 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 TNXAQ16473 311 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 LY6EQ16553 131 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 C5orf64Q2M2E5 130 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 BSXQ3C1V8 233 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 VMA21Q3ZAQ7 101 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 ALKAL2Q6UX46 152 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 TEX45Q8NA69 505 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 OR52E5Q8NH55 327 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 RAB40CQ96S21 281 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 ARPC5LQ9BPX5 153 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 ARV1Q9H2C2 271 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
RIF1-208ENST00000457745 AKAP9Q99996 3911 aa6.92□□□□□ -1.3
RIF1-208ENST00000457745 IGHV7-81A0A0B4J1V7 117 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 A0A0D9SG52 128 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 A6NDX4 124 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 TEX46H3BTG2 121 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 H3BUX3 64 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 SNAPC5O75971 98 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 ATG12O94817 140 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 IGHV4-59P01825 116 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 RPLP1P05386 114 aaKnown RBP6.91□□□□□ -1.3
RIF1-208ENST00000457745 TMEM11P17152 192 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 LGALS7P47929 136 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 HOXA1P49639 335 aaPredicted RBP6.91□□□□□ -1.3
RIF1-208ENST00000457745 COMPP49747 757 aaPredicted RBP6.91□□□□□ -1.3
RIF1-208ENST00000457745 GPR157Q5UAW9 335 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 OR8G2PQ6IF36 304 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 TEX261Q6UWH6 196 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 ZNF680Q8NEM1 530 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 OR8H1Q8NGG4 311 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 OR5C1Q8NGR4 320 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 OR2T10Q8NGZ9 312 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 ZNF471Q9BX82 626 aaPredicted RBP6.91□□□□□ -1.3
RIF1-208ENST00000457745 MEGF9Q9H1U4 602 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 NUP50Q9UKX7 468 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 PRNDQ9UKY0 176 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 WSB1Q9Y6I7 421 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 U3KQ87 197 aa6.91□□□□□ -1.3
RIF1-208ENST00000457745 TEX15Q9BXT5 2789 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 EIF3GO75821 320 aaKnown RBP eCLIP6.9□□□□□ -1.3
RIF1-208ENST00000457745 GHRHP01286 108 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 IGHV3-48P01763 117 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 PRH1P02810 166 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 PET100P0DJ07 73 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 RPL27AP46776 148 aaKnown RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 SULT1A1P50225 295 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 CX3CL1P78423 397 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 SLC38A11Q08AI6 406 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 CYB5R2Q6BCY4 276 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 PPP1R27Q86WC6 154 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 INO80EQ8NBZ0 244 aaPredicted RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 OR4A5Q8NH83 315 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 STOML3Q8TAV4 291 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 SRSF12Q8WXF0 261 aaKnown RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 P2RX4Q99571 388 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 TSNAXQ99598 290 aaKnown RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 SSX3Q99909 188 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 GON7Q9BXV9 100 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 FNDC4Q9H6D8 234 aaPredicted RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 SLA2Q9H6Q3 261 aa6.9□□□□□ -1.3
RIF1-208ENST00000457745 PAIP2BQ9ULR5 123 aaKnown RBP6.9□□□□□ -1.3
RIF1-208ENST00000457745 ZNF257Q9Y2Q1 563 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms