RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 SLC25A42Q86VD7 318 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 FAM223AQ8IWN6 122 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 OR51S1Q8NGJ8 323 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 THAP7Q9BT49 309 aaPredicted RBP8.67□□□□□ -1.02
HDAC9-217ENST00000455069 QTRT1Q9BXR0 403 aaKnown RBP8.67□□□□□ -1.02
HDAC9-217ENST00000455069 GPR61Q9BZJ8 451 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 COMMD5Q9GZQ3 224 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 NDUFA4L2Q9NRX3 87 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 TMEM14BQ9NUH8 114 aa8.67□□□□□ -1.02
HDAC9-217ENST00000455069 IGLV11-55A0A075B6I3 123 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 C3orf85A0A1B0GTC6 90 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 BMPR1BO00238 502 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 NDUFB8O95169 186 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 UCP1P25874 307 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 S100A5P33763 92 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 ETV6P41212 452 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 SURF2Q15527 256 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-217ENST00000455069 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 NECAP1Q8NC96 275 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 OR6Q1Q8NGQ2 317 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 ZFAND1Q8TCF1 268 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 CCDC140Q96MF4 163 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 SRSF8Q9BRL6 282 aaKnown RBP8.66□□□□□ -1.02
HDAC9-217ENST00000455069 SRRQ9GZT4 340 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 RANGRFQ9HD47 186 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-217ENST00000455069 COPZ2Q9P299 210 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 PEF1Q9UBV8 284 aaKnown RBP8.66□□□□□ -1.02
HDAC9-217ENST00000455069 FBXL7Q9UJT9 491 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 GPR132Q9UNW8 380 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 S4R3C0 116 aa8.66□□□□□ -1.02
HDAC9-217ENST00000455069 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.65□□□□□ -1.02
HDAC9-217ENST00000455069 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 IGHV3-23P01764 117 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 SERPINE2P07093 398 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 ECI1P42126 302 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 MFAP2P55001 183 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 ATP5G2Q06055 141 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 KLF5Q13887 457 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-217ENST00000455069 ACSM6Q6P461 480 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 Q8N402 240 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 GDPD1Q8N9F7 314 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 CCDC71LQ8N9Z2 235 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 OR1L8Q8NGR8 309 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 LHFPL5Q8TAF8 219 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 MRAPQ8TCY5 172 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 TMEM230Q96A57 120 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 SDHCQ99643 169 aaPredicted RBP8.65□□□□□ -1.02
HDAC9-217ENST00000455069 PRRT1Q99946 306 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 PRNDQ9UKY0 176 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 OR51B2Q9Y5P1 312 aa8.65□□□□□ -1.02
HDAC9-217ENST00000455069 CRYM-AS1A6NIL9 109 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PPP5D1E7EU14 171 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 SNAPC5O75971 98 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 TRAPPC2P0DI81 140 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 TRAPPC2BP0DI82 140 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 OR13C7P0DN81 318 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 ZP3P21754 424 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PRR20EP86478 221 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PRR20CP86479 221 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PRR20DP86480 221 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PRR20BP86481 221 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 PRR20AP86496 221 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 THOC7Q6I9Y2 204 aaKnown RBP8.64□□□□□ -1.03
HDAC9-217ENST00000455069 IL34Q6ZMJ4 242 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 H2BFWTQ7Z2G1 175 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 HAPLN4Q86UW8 402 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 OR5B3Q8NH48 314 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 LSM10Q969L4 123 aaKnown RBP8.64□□□□□ -1.03
HDAC9-217ENST00000455069 NAA60Q9H7X0 242 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
HDAC9-217ENST00000455069 C14orf166Q9Y224 244 aaKnown RBP8.64□□□□□ -1.03
HDAC9-217ENST00000455069 COL7A1Q02388 2944 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 A0A0B4J293 547 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 SAP30O75446 220 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 HLA-AP01891 365 aaKnown RBP8.63□□□□□ -1.03
HDAC9-217ENST00000455069 INSL3P51460 131 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 SYNJ2BPP57105 145 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 TRIM16LQ309B1 348 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 ZNF429Q86V71 674 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 TOMM5Q8N4H5 51 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 PRR25Q96S07 402 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 TSC22D3Q99576 134 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 HINT2Q9BX68 163 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 TMEM222Q9H0R3 208 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 PRR13Q9NZ81 148 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 SCP2D1Q9UJQ7 156 aa8.63□□□□□ -1.03
HDAC9-217ENST00000455069 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
HDAC9-217ENST00000455069 NBEAL2Q6ZNJ1 2754 aa8.62□□□□□ -1.03
HDAC9-217ENST00000455069 TEX13DA0A0J9YY54 714 aaPredicted RBP8.62□□□□□ -1.03
HDAC9-217ENST00000455069 CDS2O95674 445 aa8.62□□□□□ -1.03
HDAC9-217ENST00000455069 DHFRP00374 187 aa8.62□□□□□ -1.03
HDAC9-217ENST00000455069 DEFA4P12838 97 aa8.62□□□□□ -1.03
HDAC9-217ENST00000455069 HIST1H1BP16401 226 aaKnown RBP8.62□□□□□ -1.03
HDAC9-217ENST00000455069 AKR1C2P52895 323 aa8.62□□□□□ -1.03
HDAC9-217ENST00000455069 SUPT4H1P63272 117 aaKnown RBP8.62□□□□□ -1.03
HDAC9-217ENST00000455069 PRCDQ00LT1 54 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms