RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 MDKP21741 143 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-204ENST00000452182 PROK1P58294 105 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 CFHR3Q02985 330 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 C10orf55Q5SWW7 151 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 GRPEL2Q8TAA5 225 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 WIPF2Q8TF74 440 aaPredicted RBP9.1□□□□□ -0.95
SCN9A-204ENST00000452182 ABHD5Q8WTS1 349 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 FAM103A1Q9BTL3 118 aaKnown RBP9.1□□□□□ -0.95
SCN9A-204ENST00000452182 C19orf24Q9BVV8 132 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 RNF114Q9Y508 228 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 ATRQ13535 2644 aa9.1□□□□□ -0.95
SCN9A-204ENST00000452182 TRAV41A0A0B4J266 112 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 INS-IGF2F8WCM5 200 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 TRAPPC2P0DI81 140 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 TRAPPC2BP0DI82 140 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 MYOD1P15172 320 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 PPIFP30405 207 aaKnown RBP9.09□□□□□ -0.95
SCN9A-204ENST00000452182 SPCS3P61009 180 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 PRCDQ00LT1 54 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 UXS1Q8NBZ7 420 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 LFNGQ8NES3 379 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 NOL4LQ96MY1 436 aaPredicted RBP9.09□□□□□ -0.95
SCN9A-204ENST00000452182 PDCD10Q9BUL8 212 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 MPTX1A8MV57 137 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 FAM90A26D6RGX4 464 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 G3V318 75 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 BRI3O95415 125 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 OPN1MWP04001 364 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 OPN1MW2P0DN77 364 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 OPN1MW3P0DN78 364 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 SLC35B1P78383 322 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 ASPHD1Q5U4P2 390 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 UNQ5815/PRO19632Q6UWF5 114 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 MRPL41Q8IXM3 137 aaKnown RBP9.09□□□□□ -0.95
SCN9A-204ENST00000452182 TTC9CQ8N5M4 171 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 OR5M8Q8NGP6 311 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 FYTTD1Q96QD9 318 aaKnown RBP9.09□□□□□ -0.95
SCN9A-204ENST00000452182 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
SCN9A-204ENST00000452182 A0A1W2PN81 502 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 IGLC7A0M8Q6 106 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 PSMB11A5LHX3 300 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 NPIPB5A8MRT5 1133 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 SSNA1O43805 119 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 IFNA17P01571 189 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 IGHG4P01861 327 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 CRYGCP07315 174 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 CHRNA7P36544 502 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 ECSCRQ19T08 205 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 IAH1Q2TAA2 248 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-204ENST00000452182 AWAT1Q58HT5 328 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 GSG1LQ6UXU4 331 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 CENPVQ7Z7K6 275 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-204ENST00000452182 COMMD1Q8N668 190 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 KLHDC1Q8N7A1 406 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 OR1S1Q8NH92 325 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 WSB1Q9Y6I7 421 aa9.08□□□□□ -0.96
SCN9A-204ENST00000452182 HMX3A6NHT5 357 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 H3BUA1 57 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 LCE2BO14633 110 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 IGLV1-40P01703 118 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 WT1-ASQ06250 92 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 C2orf68Q2NKX9 166 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 KRTAP21-3Q3LHN1 58 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 OR4D5Q8NGN0 318 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 FAM110DQ8TAY7 271 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-204ENST00000452182 PLEKHA3Q9HB20 300 aa9.07□□□□□ -0.96
SCN9A-204ENST00000452182 CCSO14618 274 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 SOX15O60248 233 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 ELANEP08246 267 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 AREGP15514 252 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 CTRB1P17538 263 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 PSMB6P28072 239 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 ID3Q02535 119 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 FOXE3Q13461 319 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 CTRB2Q6GPI1 263 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 TEX38Q6PEX7 206 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 Q6ZNX1 250 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 OR2C3Q8N628 320 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 RNF152Q8N8N0 203 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 ZBTB8BQ8NAP8 495 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-204ENST00000452182 OR10W1Q8NGF6 305 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 C2orf50Q96LR7 162 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 HINT2Q9BX68 163 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
SCN9A-204ENST00000452182 C13orf42A0A1B0GVH6 325 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 C5orf51A6NDU8 294 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 FAM25EA8MYX2 175 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 GOSR2O14653 212 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 FBXO24O75426 580 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 MED6O75586 246 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 LY86O95711 162 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 APELAP0DMC3 54 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 OR13C7P0DN81 318 aa9.05□□□□□ -0.96
SCN9A-204ENST00000452182 PSMB8P28062 276 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms