RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TMEM56-RWDD3S4R434 201 aa11.11□□□□□ -0.63
COL3A1-203ENST00000450867 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
COL3A1-203ENST00000450867 OR5AC1P0C628 307 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 TRAPPC2P0DI81 140 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 TRAPPC2BP0DI82 140 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 AREGP15514 252 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 SUPT4H1P63272 117 aaKnown RBP11.1□□□□□ -0.63
COL3A1-203ENST00000450867 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 SP6Q3SY56 376 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 AARDQ4LEZ3 155 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 FAM219AQ8IW50 185 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 OR11H1Q8NG94 326 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 LHFPL5Q8TAF8 219 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 IL22RA2Q969J5 263 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 FYTTD1Q96QD9 318 aaKnown RBP11.1□□□□□ -0.63
COL3A1-203ENST00000450867 CCDC32Q9BV29 185 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 OR51B2Q9Y5P1 312 aa11.1□□□□□ -0.63
COL3A1-203ENST00000450867 DBX1A6NMT0 343 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 WIPF1O43516 503 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 DUS4LO95620 317 aaKnown RBP11.09□□□□□ -0.63
COL3A1-203ENST00000450867 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 CD33P20138 364 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 BTCP35070 178 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 TMEM187Q14656 261 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 RBMS2Q15434 407 aaKnown RBP11.09□□□□□ -0.63
COL3A1-203ENST00000450867 ZNF343Q6P1L6 599 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 SGPP2Q8IWX5 399 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 NECAP1Q8NC96 275 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 OR1N2Q8NGR9 330 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 S100ZQ8WXG8 99 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 RBPMSQ93062 196 aaKnown RBP11.09□□□□□ -0.63
COL3A1-203ENST00000450867 LSM10Q969L4 123 aaKnown RBP11.09□□□□□ -0.63
COL3A1-203ENST00000450867 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 ZNF355PQ9NSJ1 428 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 KCNIP3Q9Y2W7 256 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 NSG2Q9Y328 171 aa11.09□□□□□ -0.63
COL3A1-203ENST00000450867 IGLV11-55A0A075B6I3 123 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 A0A0B4J293 547 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 C13orf42A0A1B0GVH6 325 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 DHFRP00374 187 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 HIST1H1BP16401 226 aaKnown RBP11.08□□□□□ -0.64
COL3A1-203ENST00000450867 INPP1P49441 399 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 AKR1C2P52895 323 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 UBE2MP61081 183 aaKnown RBP11.08□□□□□ -0.64
COL3A1-203ENST00000450867 RHOGP84095 191 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 TRIM16LQ309B1 348 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 TMEM128Q5BJH2 165 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 SELENOHQ8IZQ5 122 aaKnown RBP11.08□□□□□ -0.64
COL3A1-203ENST00000450867 OR10W1Q8NGF6 305 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 OR4A16Q8NH70 328 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 OR5B12Q96R08 314 aa11.08□□□□□ -0.64
COL3A1-203ENST00000450867 A0A0G2JRQ6 117 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 INS-IGF2F8WCM5 200 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 LINC01619G3V211 115 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 G3V4G9 280 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 PLA2G10O15496 165 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 NDUFB6O95139 128 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 IGHV3-11P01762 117 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 PRH1P02810 166 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 HSPB1P04792 205 aaKnown RBP11.07□□□□□ -0.64
COL3A1-203ENST00000450867 HSPE1P61604 102 aaKnown RBP11.07□□□□□ -0.64
COL3A1-203ENST00000450867 PRCDQ00LT1 54 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 BEAN1Q3B7T3 259 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 FAM209BQ5JX69 171 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 RRNAD1Q96FB5 475 aaKnown RBP11.07□□□□□ -0.64
COL3A1-203ENST00000450867 MCRIP2Q9BUT9 160 aaKnown RBP11.07□□□□□ -0.64
COL3A1-203ENST00000450867 GPR61Q9BZJ8 451 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 ALX4Q9H161 411 aaPredicted RBP11.07□□□□□ -0.64
COL3A1-203ENST00000450867 DMRT1Q9Y5R6 373 aa11.07□□□□□ -0.64
COL3A1-203ENST00000450867 IGHV4OR15-8A0A075B7B6 117 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 A0A087WW49 117 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 PIGBOS1A0A0B4J2F0 54 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 CENPXA8MT69 81 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 IGLL1P15814 213 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 AKR1C4P17516 323 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 CCR6P51684 374 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 SRPXP78539 464 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 IZUMO4Q1ZYL8 232 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 PDLIM3Q53GG5 364 aaPredicted RBP11.06□□□□□ -0.64
COL3A1-203ENST00000450867 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 LRTM2Q8N967 370 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 ZNF114Q8NC26 417 aa11.06□□□□□ -0.64
COL3A1-203ENST00000450867 RANGRFQ9HD47 186 aaPredicted RBP11.06□□□□□ -0.64
COL3A1-203ENST00000450867 A0A0B4J2A0 478 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 DUXBA0A1W2PPF3 345 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 OR2J3O76001 311 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 REG1AP05451 166 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 OR13C7P0DN81 318 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 ANXA3P12429 323 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 DEFA5Q01523 94 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 EXOSC2Q13868 293 aaKnown RBP11.05□□□□□ -0.64
COL3A1-203ENST00000450867 C15orf32Q32M92 178 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 NMSQ5H8A3 153 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 Q6ZRM9 215 aa11.05□□□□□ -0.64
COL3A1-203ENST00000450867 CENPSQ8N2Z9 138 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms