RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 B5MCH6 92 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 H0YGG7 62 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PEX7O00628 323 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CDX4O14627 284 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 TAX1BP3O14907 124 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZFAND5O76080 213 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 P04436 131 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 P2RY2P41231 377 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ID3Q02535 119 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 UNC119Q13432 240 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 VGLL4Q14135 290 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 C6orf15Q6UXA7 325 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 Q6ZS49 121 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 Q71RC1 249 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 CEND1Q8N111 149 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 TMEM256Q8N2U0 113 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF740Q8NDX6 193 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 UCN2Q96RP3 112 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 MRPL20Q9BYC9 149 aaKnown RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM234AQ9H0X4 552 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SCRT2Q9NQ03 307 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PLA2G3Q9NZ20 509 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF319Q9P2F9 582 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 KCNE3Q9Y6H6 103 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FABP5P3A8MUU1 101 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PRKNO60260 465 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 STATHP02808 62 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CD70P32970 193 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FGF12P61328 243 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 RPL31P62899 125 aaKnown RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 GUSBP1Q15486 140 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM231DQ6ZW35 169 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 AAED1Q7RTV5 226 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 TMEM219Q86XT9 240 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF295-AS1Q8N0V1 137 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 DNAJC30Q96LL9 226 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 MMP17Q9ULZ9 603 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SCO2A0A1W2PP80 73 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SMIM27A0A1W2PRY6 76 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PRSS38A1L453 326 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 C22orf46C9J442 243 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 KLKB1P03952 638 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CCL1P22362 96 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 MEOX1P50221 254 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CACNG7P62955 275 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 DUSP2Q05923 314 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 IZUMO4Q1ZYL8 232 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ORMDL2Q53FV1 153 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FAM166AQ6J272 317 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF841Q6ZN19 808 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 NEGR1Q7Z3B1 354 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PLXDC1Q8IUK5 500 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 AMN1Q8IY45 258 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ST6GALNAC6Q969X2 333 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 IFI27L1Q96BM0 104 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PGLYRP4Q96LB8 373 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 YPEL4Q96NS1 127 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 HDHD3Q9BSH5 251 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 APOOQ9BUR5 198 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 FBXL15Q9H469 300 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 C12orf49Q9H741 205 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 CCL28Q9NRJ3 127 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 HIGD1AQ9Y241 93 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PLXNA1Q9UIW2 1896 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 A0A087X0K7 114 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 IGLV1-36A0A0B4J1U3 117 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 TIMM23O14925 209 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SPRY1O43609 319 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 DNAL4O96015 105 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF83P51522 516 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 HHEXQ03014 270 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 NNATQ16517 81 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ZNF718Q3SXZ3 478 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 LINC01590Q5TEZ4 76 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 TXNDC8Q6A555 127 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 VN1R2Q8NFZ6 395 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 BAHD1Q8TBE0 780 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 GLMPQ8WWB7 406 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 ABHD17AQ96GS6 310 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 VSTM2LQ96N03 204 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 GFI1Q99684 422 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SCNM1Q9BWG6 230 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 SLC25A39Q9BZJ4 359 aaPredicted RBP1.87□□□□□ -2.11
USP53-202ENST00000450251 OR2H1Q9GZK4 316 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PRO3102Q9H379 93 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 IL23AQ9NPF7 189 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 PSG8Q9UQ74 426 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 TNFRSF18Q9Y5U5 241 aa1.87□□□□□ -2.11
USP53-202ENST00000450251 LIPT2A6NK58 231 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 SH2D7A6NKC9 451 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 LAMTOR5O43504 91 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 DXOO77932 396 aaKnown RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 IGHV3-7P01780 117 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 FAM53BQ14153 422 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CEACAM21Q3KPI0 293 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 CXorf66Q5JRM2 361 aaPredicted RBP1.86□□□□□ -2.11
USP53-202ENST00000450251 UNQ6494/PRO21346Q6UXR6 183 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 WFDC8Q8IUA0 241 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 RFLNBQ8N5W9 214 aa1.86□□□□□ -2.11
USP53-202ENST00000450251 KIR3DL3Q8N743 410 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms