RNA–Protein interactions for RNA: ENST00000449704.5

TOP3B-211, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-211ENST00000449704 DEFA6Q01524 100 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 ZNF45Q02386 682 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 FHL3Q13643 280 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 OR10W1Q8NGF6 305 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 RNASE11Q8TAA1 199 aaKnown RBP12.15□□□□□ -0.46
TOP3B-211ENST00000449704 DEDD2Q8WXF8 326 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 SDHCQ99643 169 aaPredicted RBP12.15□□□□□ -0.46
TOP3B-211ENST00000449704 AKIP1Q9NQ31 210 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 FKBP11Q9NYL4 201 aa12.15□□□□□ -0.46
TOP3B-211ENST00000449704 IGHV4OR15-8A0A075B7B6 117 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 A0A087WW49 117 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 IGLC7A0M8Q6 106 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 CRYM-AS1A6NIL9 109 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 DHFRP00374 187 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 IGKV1-5P01602 117 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 HSPB1P04792 205 aaKnown RBP12.14□□□□□ -0.47
TOP3B-211ENST00000449704 CTRB1P17538 263 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 DHODHQ02127 395 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 ATP5G2Q06055 141 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 CTRB2Q6GPI1 263 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 SGPP2Q8IWX5 399 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 NECAP1Q8NC96 275 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 FBXL7Q9UJT9 491 aa12.14□□□□□ -0.47
TOP3B-211ENST00000449704 TRBV9A0A0B4J1U6 114 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 FAM223BA6NKX1 122 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 DUS4LO95620 317 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 CRYGCP07315 174 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 OR13C7P0DN81 318 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 MECP2P51608 486 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 SLURP1P55000 103 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 THOC7Q6I9Y2 204 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 TMED4Q7Z7H5 227 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 FAM223AQ8IWN6 122 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 OR5B3Q8NH48 314 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM230Q96A57 120 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 RRNAD1Q96FB5 475 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 SRSF8Q9BRL6 282 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 MCRIP2Q9BUT9 160 aaKnown RBP12.13□□□□□ -0.47
TOP3B-211ENST00000449704 NDUFA4L2Q9NRX3 87 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM14BQ9NUH8 114 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
TOP3B-211ENST00000449704 CDS2O95674 445 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 IL7P13232 177 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 EXOSC2Q13868 293 aaKnown RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 C15orf32Q32M92 178 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 BEAN1Q3B7T3 259 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 ZNF343Q6P1L6 599 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 SELENOHQ8IZQ5 122 aaKnown RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 DCUN1D4Q92564 292 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 LSM10Q969L4 123 aaKnown RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM56Q96MV1 263 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 FANCD2OSQ96PS1 177 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 SLC25A21Q9BQT8 299 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 RANGRFQ9HD47 186 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 BATF3Q9NR55 127 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 PEF1Q9UBV8 284 aaKnown RBP12.12□□□□□ -0.47
TOP3B-211ENST00000449704 MEGF8Q7Z7M0 2845 aa12.12□□□□□ -0.47
TOP3B-211ENST00000449704 NAP1L6A6NFF2 107 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 CENPXA8MT69 81 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 NDUFB8O95169 186 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 HIST1H1BP16401 226 aaKnown RBP12.11□□□□□ -0.47
TOP3B-211ENST00000449704 CCR6P51684 374 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 WT1-ASQ06250 92 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM268Q5VZI3 342 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 HSD17B13Q7Z5P4 300 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-211ENST00000449704 LHFPL5Q8TAF8 219 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 DLX4Q92988 240 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-211ENST00000449704 RBPMSQ93062 196 aaKnown RBP12.11□□□□□ -0.47
TOP3B-211ENST00000449704 GPR61Q9BZJ8 451 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 PRR13Q9NZ81 148 aa12.11□□□□□ -0.47
TOP3B-211ENST00000449704 A0A0B4J293 547 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 SEC14L6B5MCN3 397 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 OVOL1O14753 267 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 TRBV12-3P01733 135 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 IGHV3-23P01764 117 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 PRB2P02812 416 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-211ENST00000449704 P0C879 139 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 ANXA3P12429 323 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 ZP3P21754 424 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 HOXD3P31249 432 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-211ENST00000449704 HSPE1P61604 102 aaKnown RBP12.1□□□□□ -0.47
TOP3B-211ENST00000449704 TMEM187Q14656 261 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 KPRPQ5T749 579 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-211ENST00000449704 SLC25A24Q6NUK1 477 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 GALNT14Q96FL9 552 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 S4R3C0 116 aa12.1□□□□□ -0.47
TOP3B-211ENST00000449704 IGLV11-55A0A075B6I3 123 aa12.09□□□□□ -0.47
TOP3B-211ENST00000449704 A0A0G2JRQ6 117 aa12.09□□□□□ -0.47
TOP3B-211ENST00000449704 CYB5BO43169 146 aa12.09□□□□□ -0.47
TOP3B-211ENST00000449704 IFNA17P01571 189 aa12.09□□□□□ -0.47
TOP3B-211ENST00000449704 SUPT4H1P63272 117 aaKnown RBP12.09□□□□□ -0.47
TOP3B-211ENST00000449704 PRCDQ00LT1 54 aa12.09□□□□□ -0.47
TOP3B-211ENST00000449704 RBMS2Q15434 407 aaKnown RBP12.09□□□□□ -0.47
TOP3B-211ENST00000449704 LINC00299Q6ZSB3 139 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms