RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 OVOL1O14753 267 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 OR2J3O76001 311 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 BRI3O95415 125 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 HSPB1P04792 205 aaKnown RBP11.23□□□□□ -0.61
USP39-206ENST00000448971 REG1AP05451 166 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 FGF2P09038 288 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 DEFA4P12838 97 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 FAUP35544 74 aaKnown RBP11.23□□□□□ -0.61
USP39-206ENST00000448971 AP3S2P59780 193 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 SURF2Q15527 256 aaPredicted RBP11.23□□□□□ -0.61
USP39-206ENST00000448971 ZNF79Q15937 498 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 TRIM16LQ309B1 348 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 C9orf66Q5T8R8 295 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
USP39-206ENST00000448971 H2BFWTQ7Z2G1 175 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 CCDC190Q86UF4 302 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 DCUN1D4Q92564 292 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 TP53RKQ96S44 253 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 HINT2Q9BX68 163 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 QTRT1Q9BXR0 403 aaKnown RBP11.23□□□□□ -0.61
USP39-206ENST00000448971 AKIP1Q9NQ31 210 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 SCP2D1Q9UJQ7 156 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 PRNDQ9UKY0 176 aa11.23□□□□□ -0.61
USP39-206ENST00000448971 RBMXL2O75526 392 aaKnown RBP11.22□□□□□ -0.61
USP39-206ENST00000448971 PTBP1P26599 531 aaKnown RBP eCLIP11.22□□□□□ -0.61
USP39-206ENST00000448971 PSMB6P28072 239 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 ZNF45Q02386 682 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 ATP5G2Q06055 141 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 CD69Q07108 199 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 RNASE11Q8TAA1 199 aaKnown RBP11.22□□□□□ -0.61
USP39-206ENST00000448971 DLX4Q92988 240 aaPredicted RBP11.22□□□□□ -0.61
USP39-206ENST00000448971 TRIM63Q969Q1 353 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 RANGRFQ9HD47 186 aaPredicted RBP11.22□□□□□ -0.61
USP39-206ENST00000448971 OR51B2Q9Y5P1 312 aa11.22□□□□□ -0.61
USP39-206ENST00000448971 TEX13DA0A0J9YY54 714 aaPredicted RBP11.21□□□□□ -0.61
USP39-206ENST00000448971 CGB1A6NKQ9 187 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 C15orf61A6NNL5 157 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 LCE2BO14633 110 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 ATG12O94817 140 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 TRAPPC2P0DI81 140 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 TRAPPC2BP0DI82 140 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 ZP3P21754 424 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 INPP1P49441 399 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 MECP2P51608 486 aaKnown RBP11.21□□□□□ -0.61
USP39-206ENST00000448971 C15orf32Q32M92 178 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 NECAP1Q8NC96 275 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 OR1L8Q8NGR8 309 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 OR4A16Q8NH70 328 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 LSM10Q969L4 123 aaKnown RBP11.21□□□□□ -0.61
USP39-206ENST00000448971 SEC22AQ96IW7 307 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
USP39-206ENST00000448971 SLC2A8Q9NY64 477 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 PEF1Q9UBV8 284 aaKnown RBP11.21□□□□□ -0.61
USP39-206ENST00000448971 FBXL7Q9UJT9 491 aa11.21□□□□□ -0.61
USP39-206ENST00000448971 TRBV9A0A0B4J1U6 114 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 IGLC7A0M8Q6 106 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 SAP30O75446 220 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 CRYGCP07315 174 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 HIST1H1BP16401 226 aaKnown RBP11.2□□□□□ -0.62
USP39-206ENST00000448971 CTRB1P17538 263 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
USP39-206ENST00000448971 RPEL1Q2QD12 228 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 SP6Q3SY56 376 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 CTRB2Q6GPI1 263 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 ZNF343Q6P1L6 599 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 HSD17B13Q7Z5P4 300 aaPredicted RBP11.2□□□□□ -0.62
USP39-206ENST00000448971 OR6Q1Q8NGQ2 317 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 OR5B3Q8NH48 314 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 C5orf66Q9H5L9 145 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 NAA60Q9H7X0 242 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 FKBP11Q9NYL4 201 aa11.2□□□□□ -0.62
USP39-206ENST00000448971 TEX50A0A1B0GTY4 177 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 CYB5BO43169 146 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 B3GALNT1O75752 331 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 TRBV12-3P01733 135 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 OR5AC1P0C628 307 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 ETV6P41212 452 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 TRIQKQ629K1 86 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 ZNF57Q68EA5 555 aaPredicted RBP11.19□□□□□ -0.62
USP39-206ENST00000448971 CADM3Q8N126 398 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 OR10W1Q8NGF6 305 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 SCGB3A2Q96PL1 93 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 RTBDNQ9BSG5 229 aaPredicted RBP11.19□□□□□ -0.62
USP39-206ENST00000448971 SRRQ9GZT4 340 aa11.19□□□□□ -0.62
USP39-206ENST00000448971 ZMAT5Q9UDW3 170 aaKnown RBP11.19□□□□□ -0.62
USP39-206ENST00000448971 DYNC2H1Q8NCM8 4307 aaKnown RBP11.19□□□□□ -0.62
USP39-206ENST00000448971 TENM2Q9NT68 2774 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 CRYM-AS1A6NIL9 109 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 DBX1A6NMT0 343 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 IGHV3-23P01764 117 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 UCP1P25874 307 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 FAM209BQ5JX69 171 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 SGPP2Q8IWX5 399 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 GDPD1Q8N9F7 314 aa11.18□□□□□ -0.62
USP39-206ENST00000448971 EEF1AKMT3Q96AZ1 226 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms