RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 USMG5Q96IX5 58 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM56Q96MV1 263 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 SRSF8Q9BRL6 282 aaKnown RBP10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 CCDC32Q9BV29 185 aa10.89□□□□□ -0.67
GTF3C3-206ENST00000448539 TEX50A0A1B0GTY4 177 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 FAM223BA6NKX1 122 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 C15orf61A6NNL5 157 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 I3L521 148 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 CYB5BO43169 146 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 CDS2O95674 445 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 PRH1P02810 166 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 AREGP15514 252 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 RHOGP84095 191 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 ZNF616Q08AN1 781 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 ETV3LQ6ZN32 361 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 FAM223AQ8IWN6 122 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 GLYATL2Q8WU03 294 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 RBPMSQ93062 196 aaKnown RBP10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM230Q96A57 120 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 P2RX4Q99571 388 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 PDCD10Q9BUL8 212 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 WDR12Q9GZL7 423 aaKnown RBP10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM14BQ9NUH8 114 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 TNCP24821 2201 aa10.88□□□□□ -0.67
GTF3C3-206ENST00000448539 WNK1Q9H4A3 2382 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 PIGBOS1A0A0B4J2F0 54 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 A0A1B0GW64 132 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CGB1A6NKQ9 187 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 IGKV1-5P01602 117 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 REG1AP05451 166 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CRYGCP07315 174 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 OR13C7P0DN81 318 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 HIST1H1BP16401 226 aaKnown RBP10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CTRB1P17538 263 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 VAMP1P23763 118 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CCR6P51684 374 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 SRPXP78539 464 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 ATP5G2Q06055 141 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 ZNF846Q147U1 533 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM128Q5BJH2 165 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM268Q5VZI3 342 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CTRB2Q6GPI1 263 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 FAM219AQ8IW50 185 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 SELENOHQ8IZQ5 122 aaKnown RBP10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 CENPSQ8N2Z9 138 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 LINC00482Q8N8I6 264 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 NECAP1Q8NC96 275 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 WFDC9Q8NEX5 89 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 LSM10Q969L4 123 aaKnown RBP10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 GALNT14Q96FL9 552 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 NDUFA4L2Q9NRX3 87 aa10.87□□□□□ -0.67
GTF3C3-206ENST00000448539 IGLC7A0M8Q6 106 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 LINC01619G3V211 115 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 LYRM1O43325 122 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 OR2J3O76001 311 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 NDUFB6O95139 128 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 HSPB1P04792 205 aaKnown RBP10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 DEFA5Q01523 94 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM187Q14656 261 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 IZUMO4Q1ZYL8 232 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 LGI3Q8N145 548 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 OR10W1Q8NGF6 305 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 IL22RA2Q969J5 263 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 RCC1LQ96I51 464 aaKnown RBP10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 ALX4Q9H161 411 aaPredicted RBP10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 FBXL7Q9UJT9 491 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 TMEM56-RWDD3S4R434 201 aa10.86□□□□□ -0.67
GTF3C3-206ENST00000448539 TRBV9A0A0B4J1U6 114 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 ANKRD34BA5PLL1 514 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 DBX1A6NMT0 343 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 DUS4LO95620 317 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 IFNA17P01571 189 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 HSPE1P61604 102 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 ZNF429Q86V71 674 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 SLC35G3Q8N808 338 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 LHFPL5Q8TAF8 219 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 MCRIP2Q9BUT9 160 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 GPR61Q9BZJ8 451 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 PLEKHA3Q9HB20 300 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 RANGRFQ9HD47 186 aaPredicted RBP10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 ENY2Q9NPA8 101 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 THYN1Q9P016 225 aa10.85□□□□□ -0.67
GTF3C3-206ENST00000448539 IGHV4OR15-8A0A075B7B6 117 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 A0A087WW49 117 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 P0C879 139 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 IGLL1P15814 213 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 UBE2MP61081 183 aaKnown RBP10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 ERHP84090 104 aaKnown RBP10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 DEFA6Q01524 100 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 WT1-ASQ06250 92 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 FHL3Q13643 280 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 EXOSC2Q13868 293 aaKnown RBP10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 C15orf32Q32M92 178 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 FAM209BQ5JX69 171 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 C19orf35Q6ZS72 473 aa10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.84□□□□□ -0.67
GTF3C3-206ENST00000448539 PRR13Q9NZ81 148 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms