RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ABHD5Q8WTS1 349 aa12.12□□□□□ -0.47
SF1-211ENST00000448404 E7EUB6 86 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 NPPCP23582 126 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 GATA4P43694 442 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 C10orf55Q5SWW7 151 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 FAM222BQ8WU58 562 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 FRZBQ92765 325 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 MGST2Q99735 147 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 SMIM7Q9BQ49 75 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 CISD1Q9NZ45 108 aaKnown RBP12.11□□□□□ -0.47
SF1-211ENST00000448404 CTSZQ9UBR2 303 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 LGALS4P56470 323 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 MRGPRGQ86SM5 289 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 PINX1Q96BK5 328 aaKnown RBP12.11□□□□□ -0.47
SF1-211ENST00000448404 MRPL20Q9BYC9 149 aaKnown RBP12.11□□□□□ -0.47
SF1-211ENST00000448404 RAXQ9Y2V3 346 aa12.11□□□□□ -0.47
SF1-211ENST00000448404 E7EQL1 145 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 ACTL6BO94805 426 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 TNFSF4P23510 183 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 ARSJQ5FYB0 599 aaPredicted RBP12.1□□□□□ -0.47
SF1-211ENST00000448404 C19orf35Q6ZS72 473 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 HIVEP3Q5T1R4 2406 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 CA2P00918 260 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
SF1-211ENST00000448404 CST9LP1Q5W188 147 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 LHFPL4Q7Z7J7 247 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 RITA1Q96K30 269 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 VAX2Q9UIW0 290 aa12.1□□□□□ -0.47
SF1-211ENST00000448404 CHRNB4P30926 498 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 DPPA3Q6W0C5 159 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 FOXH1O75593 365 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 OR13D1Q8NGV5 346 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 OR4S2Q8NH73 311 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 HIST1H2BLQ99880 126 aa12.09□□□□□ -0.47
SF1-211ENST00000448404 SEPSECSQ9HD40 501 aaKnown RBP12.09□□□□□ -0.47
SF1-211ENST00000448404 CDC34P49427 236 aaPredicted RBP12.08□□□□□ -0.48
SF1-211ENST00000448404 ASPHD1Q5U4P2 390 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 ZNF664Q8N3J9 261 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 CIB3Q96Q77 187 aaPredicted RBP12.08□□□□□ -0.48
SF1-211ENST00000448404 HIPK2Q9H2X6 1198 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 PARLQ9H300 379 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 DYNLRB1Q9NP97 96 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 WDR83OSQ9Y284 106 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 CTXND1A0A1B0GTU2 59 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
SF1-211ENST00000448404 A8MWP6 167 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 PAX5Q02548 391 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 SDF2L1Q9HCN8 221 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 SLC35D1Q9NTN3 355 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
SF1-211ENST00000448404 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
SF1-211ENST00000448404 ELOA3CA0A087WX78 387 aaPredicted RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 EREGO14944 169 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 IGFBP2P18065 325 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 NUTF2P61970 127 aaKnown RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 GNB2P62879 340 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 TPSG1Q9NRR2 321 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 OR51B2Q9Y5P1 312 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 PRSS46E5RG02 174 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 DVL1O14640 695 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 ARL14EPLP0DKL9 152 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 PRSS8Q16651 343 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 C1orf174Q8IYL3 243 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 ZNF114Q8NC26 417 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 GGTLC1Q9BX51 225 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 ACTR3CQ9C0K3 210 aaPredicted RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 PXMP4Q9Y6I8 212 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 PPIAL4EA0A075B759 164 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 PPIAL4DF5H284 164 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 K7ENP7 123 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 PPIAL4FP0DN26 164 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 NUP37Q8NFH4 326 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 RNASE6Q93091 150 aaKnown RBP12.07□□□□□ -0.48
SF1-211ENST00000448404 TMEM106BQ9NUM4 274 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 PPIAL4AQ9Y536 164 aa12.07□□□□□ -0.48
SF1-211ENST00000448404 SPG11Q96JI7 2443 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 SIAH2O43255 324 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 REG1AP05451 166 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 SFTPCP11686 197 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 PDLIM3Q53GG5 364 aaPredicted RBP12.06□□□□□ -0.48
SF1-211ENST00000448404 LBHQ53QV2 105 aaPredicted RBP12.06□□□□□ -0.48
SF1-211ENST00000448404 SLC35E3Q7Z769 313 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 FAM216AQ8WUB2 273 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 FAM210BQ96KR6 192 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 IGKV1OR2-108A0A075B7D4 117 aa12.06□□□□□ -0.48
SF1-211ENST00000448404 C11orf94C9JXX5 98 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms