RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 TRAPPC2P0DI81 140 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 TRAPPC2BP0DI82 140 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 DEFA4P12838 97 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 IL7P13232 177 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 UCP1P25874 307 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 PSMB6P28072 239 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 CCR6P51684 374 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 RUNX1Q01196 453 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 EXOSC2Q13868 293 aaKnown RBP9.21□□□□□ -0.94
RFC4-208ENST00000447345 SGPP2Q8IWX5 399 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 WFDC9Q8NEX5 89 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 OR1L8Q8NGR8 309 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 OR4A16Q8NH70 328 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 LHFPL5Q8TAF8 219 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 RCC1LQ96I51 464 aaKnown RBP9.21□□□□□ -0.94
RFC4-208ENST00000447345 TSC22D3Q99576 134 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 TMEM222Q9H0R3 208 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 PRNDQ9UKY0 176 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 S4R3C0 116 aa9.21□□□□□ -0.94
RFC4-208ENST00000447345 A0A0G2JRQ6 117 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 LINC01619G3V211 115 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 TRBV12-3P01733 135 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 IGHV3-23P01764 117 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 PRB2P02812 416 aaPredicted RBP9.2□□□□□ -0.94
RFC4-208ENST00000447345 OR13C7P0DN81 318 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 CTRB1P17538 263 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 HOXD3P31249 432 aaPredicted RBP9.2□□□□□ -0.94
RFC4-208ENST00000447345 C15orf32Q32M92 178 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 BEAN1Q3B7T3 259 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 SPINK9Q5DT21 86 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 TMEM268Q5VZI3 342 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 CTRB2Q6GPI1 263 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 LSM10Q969L4 123 aaKnown RBP9.2□□□□□ -0.94
RFC4-208ENST00000447345 SCGB3A2Q96PL1 93 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 FBXL7Q9UJT9 491 aa9.2□□□□□ -0.94
RFC4-208ENST00000447345 FAM223BA6NKX1 122 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 B3GALNT1O75752 331 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 ATG12O94817 140 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 NDUFB8O95169 186 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 BRI3O95415 125 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 DHFRP00374 187 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 HSPB1P04792 205 aaKnown RBP9.19□□□□□ -0.94
RFC4-208ENST00000447345 CRYGCP07315 174 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 ATP5G2Q06055 141 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 WT1-ASQ06250 92 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 FAM223AQ8IWN6 122 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 NECAP1Q8NC96 275 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 GLYATL2Q8WU03 294 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 DCUN1D4Q92564 292 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 RRNAD1Q96FB5 475 aaKnown RBP9.19□□□□□ -0.94
RFC4-208ENST00000447345 USMG5Q96IX5 58 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 NDUFA4L2Q9NRX3 87 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 TMEM14BQ9NUH8 114 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 PTTG2Q9NZH5 202 aa9.19□□□□□ -0.94
RFC4-208ENST00000447345 IGLV11-55A0A075B6I3 123 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 TRBV9A0A0B4J1U6 114 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 SEC14L6B5MCN3 397 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 NXPH3O95157 252 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 DUS4LO95620 317 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 CDS2O95674 445 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 FGF2P09038 288 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 P0C879 139 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 VAMP1P23763 118 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 SUPT4H1P63272 117 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 DHODHQ02127 395 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 RBMS2Q15434 407 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 THOC7Q6I9Y2 204 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 ZNF343Q6P1L6 599 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 SELENOHQ8IZQ5 122 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 SLC35G3Q8N808 338 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 OR5B3Q8NH48 314 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 DEDD2Q8WXF8 326 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 DLX4Q92988 240 aaPredicted RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 RBPMSQ93062 196 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 TMEM56Q96MV1 263 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 FANCD2OSQ96PS1 177 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 MCRIP2Q9BUT9 160 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 FKBP11Q9NYL4 201 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 PEF1Q9UBV8 284 aaKnown RBP9.18□□□□□ -0.94
RFC4-208ENST00000447345 DMRT1Q9Y5R6 373 aa9.18□□□□□ -0.94
RFC4-208ENST00000447345 A0A0B4J293 547 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 NAP1L6A6NFF2 107 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 MFSD2BA6NFX1 497 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 CENPXA8MT69 81 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 PPP5D1E7EU14 171 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 OVOL1O14753 267 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 IFNA17P01571 189 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 PRCDQ00LT1 54 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 TMEM187Q14656 261 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 HSD17B13Q7Z5P4 300 aaPredicted RBP9.17□□□□□ -0.94
RFC4-208ENST00000447345 CADM3Q8N126 398 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 CENPSQ8N2Z9 138 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 SLC25A21Q9BQT8 299 aaPredicted RBP9.17□□□□□ -0.94
RFC4-208ENST00000447345 SRSF8Q9BRL6 282 aaKnown RBP9.17□□□□□ -0.94
RFC4-208ENST00000447345 PDCD10Q9BUL8 212 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 PLEKHA3Q9HB20 300 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 RANGRFQ9HD47 186 aaPredicted RBP9.17□□□□□ -0.94
RFC4-208ENST00000447345 BATF3Q9NR55 127 aa9.17□□□□□ -0.94
RFC4-208ENST00000447345 KCNIP3Q9Y2W7 256 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms