RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RTBDNQ9BSG5 229 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-204ENST00000446876 C5orf66Q9H5L9 145 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 RANGRFQ9HD47 186 aaPredicted RBP11.39□□□□□ -0.59
HDAC4-204ENST00000446876 MCUBQ9NWR8 336 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 PEF1Q9UBV8 284 aaKnown RBP11.39□□□□□ -0.59
HDAC4-204ENST00000446876 FBXL7Q9UJT9 491 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 OR51B2Q9Y5P1 312 aa11.39□□□□□ -0.59
HDAC4-204ENST00000446876 C15orf61A6NNL5 157 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 SNAPC5O75971 98 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 TRAPPC2P0DI81 140 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 TRAPPC2BP0DI82 140 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 WT1-ASQ06250 92 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 KLF9Q13886 244 aaPredicted RBP11.38□□□□□ -0.59
HDAC4-204ENST00000446876 H2BFWTQ7Z2G1 175 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 Q8N402 240 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 NECAP1Q8NC96 275 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 OR1L8Q8NGR8 309 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 PRRT1Q99946 306 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
HDAC4-204ENST00000446876 DMRT1Q9Y5R6 373 aa11.38□□□□□ -0.59
HDAC4-204ENST00000446876 IGLV11-55A0A075B6I3 123 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 SAP30O75446 220 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 IGKV1-5P01602 117 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 FGF2P09038 288 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 OR5AC1P0C628 307 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 OR13C7P0DN81 318 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 DEFA4P12838 97 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 ZP3P21754 424 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 ECI1P42126 302 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 TRIM16LQ309B1 348 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 HAPLN4Q86UW8 402 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 OR6Q1Q8NGQ2 317 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 NDUFA4L2Q9NRX3 87 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 TMEM14BQ9NUH8 114 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 SLC2A8Q9NY64 477 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 PRNDQ9UKY0 176 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 GPR132Q9UNW8 380 aa11.37□□□□□ -0.59
HDAC4-204ENST00000446876 MFSD2BA6NFX1 497 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 PPP5D1E7EU14 171 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 BMPR1BO00238 502 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 UCP1P25874 307 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 AKR1C2P52895 323 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 SYNJ2BPP57105 145 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 SURF2Q15527 256 aaPredicted RBP11.36□□□□□ -0.59
HDAC4-204ENST00000446876 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 CADM3Q8N126 398 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 OR4A16Q8NH70 328 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 CCDC140Q96MF4 163 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 PRR25Q96S07 402 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 TSC22D3Q99576 134 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 SRRQ9GZT4 340 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 NAA60Q9H7X0 242 aa11.36□□□□□ -0.59
HDAC4-204ENST00000446876 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 A0A0G2JRQ6 117 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 TEX13DA0A0J9YY54 714 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 DHFRP00374 187 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 HLA-AP01891 365 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 P0C879 139 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 ETV6P41212 452 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 MECP2P51608 486 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 MFAP2P55001 183 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 KLF5Q13887 457 aaPredicted RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 RPEL1Q2QD12 228 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 SPINK9Q5DT21 86 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 SPANXN2Q5MJ10 180 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 THOC7Q6I9Y2 204 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 TOMM5Q8N4H5 51 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 GDPD1Q8N9F7 314 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 LHFPL5Q8TAF8 219 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 TMEM230Q96A57 120 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 SRSF8Q9BRL6 282 aaKnown RBP11.35□□□□□ -0.59
HDAC4-204ENST00000446876 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 SCP2D1Q9UJQ7 156 aa11.35□□□□□ -0.59
HDAC4-204ENST00000446876 CRYM-AS1A6NIL9 109 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 HIST1H1BP16401 226 aaKnown RBP11.34□□□□□ -0.59
HDAC4-204ENST00000446876 KLK9Q2XQG4 91 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 CLEC19AQ6UXS0 136 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 ZNF429Q86V71 674 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 OR5B3Q8NH48 314 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 TMEM222Q9H0R3 208 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 ZC4H2Q9NQZ6 224 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 KLK9Q9UKQ9 250 aa11.34□□□□□ -0.59
HDAC4-204ENST00000446876 IGHV3-21A0A0B4J1V1 117 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 A0A0B4J293 547 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 INSL3P51460 131 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 AP3S2P59780 193 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 SLC25A24Q6NUK1 477 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 OR9G4Q8NGQ1 327 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 RNASE11Q8TAA1 199 aaKnown RBP11.33□□□□□ -0.6
HDAC4-204ENST00000446876 GLYATL2Q8WU03 294 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 EEF1AKMT3Q96AZ1 226 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 OR4C12Q96R67 309 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 FKBP11Q9NYL4 201 aa11.33□□□□□ -0.6
HDAC4-204ENST00000446876 F11RQ9Y624 299 aaKnown RBP11.33□□□□□ -0.6
HDAC4-204ENST00000446876 TGP01266 2768 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 LY86O95711 162 aa11.32□□□□□ -0.6
HDAC4-204ENST00000446876 SPNP16150 400 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms