RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 HIST1H1BP16401 226 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 CNPY1Q3B7I2 92 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 FAM209BQ5JX69 171 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 KPRPQ5T749 579 aaPredicted RBP11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 SGPP2Q8IWX5 399 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 NECAP1Q8NC96 275 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 GLYATL2Q8WU03 294 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 DUX3Q96PT4 197 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 OR5B12Q96R08 314 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 C7orf50Q9BRJ6 194 aaKnown RBP11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 KCNIP3Q9Y2W7 256 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 NOTCH3Q9UM47 2321 aa11.63□□□□□ -0.55
CSNK1E-210ENST00000442216 IGLC7A0M8Q6 106 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 LINC01619G3V211 115 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 G3V4G9 280 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 P0C879 139 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 AREGP15514 252 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 AKR1C2P52895 323 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 RHOGP84095 191 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 SP6Q3SY56 376 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 ZNF343Q6P1L6 599 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 ZNF429Q86V71 674 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 FAM219AQ8IW50 185 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 OR4A16Q8NH70 328 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM230Q96A57 120 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM56Q96MV1 263 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 RANGRFQ9HD47 186 aaPredicted RBP11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 NSG2Q9Y328 171 aa11.62□□□□□ -0.55
CSNK1E-210ENST00000442216 PIGBOS1A0A0B4J2F0 54 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 CENPXA8MT69 81 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 IGKV1-5P01602 117 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 IGLL1P15814 213 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 ATP5G2Q06055 141 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 RBMS2Q15434 407 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 BEAN1Q3B7T3 259 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 OXLD1Q5BKU9 147 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 S100ZQ8WXG8 99 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 RBPMSQ93062 196 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 IL22RA2Q969J5 263 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 RRNAD1Q96FB5 475 aaKnown RBP11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 ALX4Q9H161 411 aaPredicted RBP11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 AKIP1Q9NQ31 210 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 PTTG2Q9NZH5 202 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM56-RWDD3S4R434 201 aa11.61□□□□□ -0.55
CSNK1E-210ENST00000442216 IGHV4OR15-8A0A075B7B6 117 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 A0A087WW49 117 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 CYB5BO43169 146 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 PRH1P02810 166 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 ANXA3P12429 323 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 DEFA4P12838 97 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 IL7P13232 177 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 ZP3P21754 424 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 RAB25P57735 213 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 HSPE1P61604 102 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM128Q5BJH2 165 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 FANCD2OSQ96PS1 177 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 CCDC32Q9BV29 185 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 THYN1Q9P016 225 aa11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 PEF1Q9UBV8 284 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-210ENST00000442216 IGLV11-55A0A075B6I3 123 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 WIPF1O43516 503 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 RBMXL2O75526 392 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 OR2J3O76001 311 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 AKR1C4P17516 323 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 SUPT4H1P63272 117 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 SRPXP78539 464 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 PRCDQ00LT1 54 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 WT1-ASQ06250 92 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 TMEM187Q14656 261 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 C15orf32Q32M92 178 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 SELENOHQ8IZQ5 122 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 OR10W1Q8NGF6 305 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 OR1L6Q8NGR2 347 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 FBXL7Q9UJT9 491 aa11.59□□□□□ -0.55
CSNK1E-210ENST00000442216 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 DBX1A6NMT0 343 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 INS-IGF2F8WCM5 200 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 REG1AP05451 166 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 OR13C7P0DN81 318 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 UBE2MP61081 183 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 EXOSC2Q13868 293 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 C9orf66Q5T8R8 295 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 TMEM268Q5VZI3 342 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 C1QL4Q86Z23 238 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 RNASE11Q8TAA1 199 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 LHFPL5Q8TAF8 219 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 HINT2Q9BX68 163 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.56
CSNK1E-210ENST00000442216 A0A0B4J293 547 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 OVOL1O14753 267 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 NDUFB6O95139 128 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 INSL3P51460 131 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 MECP2P51608 486 aaKnown RBP11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 DEFA5Q01523 94 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 DEFA6Q01524 100 aa11.57□□□□□ -0.56
CSNK1E-210ENST00000442216 AARDQ4LEZ3 155 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms