RNA–Protein interactions for RNA: ENST00000441915.5

SEMA3B-207, Transcript of semaphorin 3B, humanhuman

TSL 1 (best)

Gene SEMA3B, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-207ENST00000441915 RPL29P47914 159 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 UTF1Q5T230 341 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 VHLLQ6RSH7 139 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 NCOR1P1Q9H4R4 102 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 KBTBD11-OT1A0A1B0GTJ5 212 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 GLRXP35754 106 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 MRPS11P82912 194 aaKnown RBP13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
SEMA3B-207ENST00000441915 CA2P00918 260 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 OR4A8P0C604 315 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 LYG1Q8N1E2 194 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 CORO2AQ92828 525 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 TRGV10A0A0A0MS01 117 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 MBD3L4A6NDZ8 208 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 MBD3L3A6NE82 208 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 MBD3L5A6NJ08 208 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 RPLP1P05386 114 aaKnown RBP13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 GNG10P50151 68 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 TIMM23BQ5SRD1 257 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 FAM201AQ5SY85 155 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 SPATA31B1PQ5VZV4 182 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 MBD3L2Q8NHZ7 208 aaPredicted RBP13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 ADTRPQ96IZ2 230 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
SEMA3B-207ENST00000441915 M0QZK8 103 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 WT1P19544 449 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 SEM1Q6ZVN7 128 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 OR4P4Q8NGL7 312 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 UHRF2Q96PU4 802 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 DSCAMO60469 2012 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 YPEL3P61236 119 aaPredicted RBP13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 ZNF90Q03938 601 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 TCF23Q7RTU1 214 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 WFIKKN1Q96NZ8 548 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 IDI2-AS1Q9NZ38 188 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 IGFBP2P18065 325 aa13.55□□□□□ -0.24
SEMA3B-207ENST00000441915 FOXH1O75593 365 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRR20EP86478 221 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRR20CP86479 221 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRR20DP86480 221 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRR20BP86481 221 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRR20AP86496 221 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 COTL1Q14019 142 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 TMEM256Q8N2U0 113 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 NEUROG1Q92886 237 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 OR51B2Q9Y5P1 312 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 A6NNC1 897 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 A8MXE2 369 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 C9JCJ5 164 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 FNDC10F2Z333 226 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 ADMP35318 185 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 C11orf52Q96A22 123 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 IL36BQ9NZH7 164 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 RNF7Q9UBF6 113 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 PRNDQ9UKY0 176 aa13.54□□□□□ -0.24
SEMA3B-207ENST00000441915 DSCAML1Q8TD84 2053 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 IGLV3-9A0A075B6K5 115 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 TRAV9-1A0A075B6T8 112 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 J3QR06 171 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 SCGB1D1O95968 90 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 GATA4P43694 442 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 POU2AF1Q16633 256 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 DEFB109BQ30KR1 87 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 FAM222BQ8WU58 562 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 SFXN3Q9BWM7 321 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 PLEKHA3Q9HB20 300 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 FKBP11Q9NYL4 201 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 LY96Q9Y6Y9 160 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 ICE1Q9Y2F5 2266 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 K7EN84 100 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 C1orf194Q5T5A4 169 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 DMRTA1Q5VZB9 504 aa13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 ZNF474Q6S9Z5 364 aaPredicted RBP13.53□□□□□ -0.24
SEMA3B-207ENST00000441915 A0A1B0GUS0 222 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 ACTL6BO94805 426 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 MYOD1P15172 320 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 SELENOVP59797 346 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 DUX4L9Q6RFH8 374 aaPredicted RBP13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 LRFN3Q9BTN0 628 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 GCM1Q9NP62 436 aa13.52□□□□□ -0.24
SEMA3B-207ENST00000441915 FTH1P19P0C7X4 201 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 AREGP15514 252 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 ZNF439Q8NDP4 499 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 DEFB108BQ8NET1 73 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 EAF1Q96JC9 268 aaPredicted RBP13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 TMEM167BQ9NRX6 74 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 ZNF257Q9Y2Q1 563 aa13.52□□□□□ -0.25
SEMA3B-207ENST00000441915 TANC2Q9HCD6 1990 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC17A3O00476 420 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 PSG5Q15238 335 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 HLA-DRB5Q30154 266 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 STUMQ69YW2 141 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 MIR17HGQ75NE6 70 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 MS4A10Q96PG2 267 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC25A10Q9UBX3 287 aaPredicted RBP13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 SLC45A2Q9UMX9 530 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 ARL2-SNX15V9GYD0 113 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 LINC00869P0C866 280 aa13.51□□□□□ -0.25
SEMA3B-207ENST00000441915 CBLN1P23435 193 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms