RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 RRHO14718 337 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 CXorf1O96002 111 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 HINT1P49773 126 aaPredicted RBP7.1□□□□□ -1.27
HPS4-206ENST00000439453 TGFBR3Q03167 851 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZNF718Q3SXZ3 478 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 UNQ5815/PRO19632Q6UWF5 114 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 H2BFWTQ7Z2G1 175 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR8I2Q8N0Y5 310 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 KLHDC1Q8N7A1 406 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZBTB34Q8NCN2 500 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZNF439Q8NDP4 499 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR2M7Q8NG81 312 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ABHD3Q8WU67 409 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 BORCS7Q96B45 105 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 C5orf30Q96GV9 206 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR2D2Q9H210 308 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 NAT8BQ9UHF3 227 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 COX11Q9Y6N1 276 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 HIVEP3Q5T1R4 2406 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 OR5B21A6NL26 309 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ANKRD30BLA7E2S9 258 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 CLDN14O95500 239 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZNF83P51522 516 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 PRRX1P54821 245 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 RPL31P62899 125 aaKnown RBP7.1□□□□□ -1.27
HPS4-206ENST00000439453 LYG1Q8N1E2 194 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ZNF738Q8NE65 137 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 ALKBH7Q9BT30 221 aaPredicted RBP7.1□□□□□ -1.27
HPS4-206ENST00000439453 SERTAD4Q9NUC0 356 aa7.1□□□□□ -1.27
HPS4-206ENST00000439453 DPRXA6NFQ7 191 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 FAM166BA8MTA8 275 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 OR2H2O95918 312 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 SRD5A2P31213 254 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 CEACAM8P31997 349 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 KIAA1644Q3SXP7 199 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 NRN1LQ496H8 165 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 TCTEX1D1Q8N7M0 179 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 WNT10AQ9GZT5 417 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 RNF24Q9Y225 148 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 V9GYV3 84 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 FREM1Q5H8C1 2179 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 LOC105371242A0A075B767 164 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 SS18L1O75177 396 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 CA6P23280 308 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 TSPOP30536 169 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 OPRK1P41145 380 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 MEOX1P50221 254 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 BRWD1-AS2P59051 145 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 CATR1Q13166 79 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 EIF4EBP1Q13541 118 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 EAF1Q96JC9 268 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 PKIBQ9C010 78 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 MBNL3Q9NUK0 354 aaKnown RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 BET1LQ9NYM9 111 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 ABI3Q9P2A4 366 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 MRPS16Q9Y3D3 137 aaKnown RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 C9JCJ5 164 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 SPINK4O60575 86 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 MT-ND6P03923 174 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 RFPL3SP0C7P2 107 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 RAC2P15153 192 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 MRPL49Q13405 166 aaKnown RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 WDR73Q6P4I2 378 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 NIT1Q86X76 327 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 MPC1Q9Y5U8 109 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 LY96Q9Y6Y9 160 aa7.09□□□□□ -1.27
HPS4-206ENST00000439453 USP9XQ93008 2570 aaPredicted RBP7.09□□□□□ -1.27
HPS4-206ENST00000439453 MPDU1O75352 247 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 REG1AP05451 166 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 PDLIM3Q53GG5 364 aaPredicted RBP7.08□□□□□ -1.28
HPS4-206ENST00000439453 SPATA46Q5T0L3 261 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 MIC13Q5XKP0 118 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 TMEM136Q6ZRR5 245 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 UHRF2Q96PU4 802 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 GCM1Q9NP62 436 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 MED12LQ86YW9 2145 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 TRGV10A0A0A0MS01 117 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 J3QT63 122 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 GCHFRP30047 84 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 GFRA1P56159 465 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 MORN2Q502X0 79 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 FAM53AQ6NSI3 398 aaPredicted RBP7.08□□□□□ -1.28
HPS4-206ENST00000439453 OR2D3Q8NGH3 330 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 DNAJC13O75165 2243 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 SVILO95425 2214 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 CRYBG3Q68DQ2 2970 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 HSBP1L1C9JCN9 74 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 MRPL33O75394 65 aaKnown RBP7.08□□□□□ -1.28
HPS4-206ENST00000439453 CELA3AP09093 270 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 TREML4Q6UXN2 200 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 ATOH7Q8N100 152 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 ZNF596Q8TC21 504 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 C11orf52Q96A22 123 aa7.08□□□□□ -1.28
HPS4-206ENST00000439453 POM121L2Q96KW2 1035 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms