RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 FAM223BA6NKX1 122 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 H0Y980 276 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 FGF2P09038 288 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 ATP5G2Q06055 141 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 C15orf32Q32M92 178 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 PYDC2Q56P42 97 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 ACSM6Q6P461 480 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 HAPLN4Q86UW8 402 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 FAM223AQ8IWN6 122 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 NECAP1Q8NC96 275 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 OR6Q1Q8NGQ2 317 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 LHFPL5Q8TAF8 219 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 MRAPQ8TCY5 172 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 TMEM230Q96A57 120 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 CCDC140Q96MF4 163 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 SDHCQ99643 169 aaPredicted RBP10.15□□□□□ -0.78
LINC00399-201ENST00000439008 QTRT1Q9BXR0 403 aaKnown RBP10.15□□□□□ -0.78
LINC00399-201ENST00000439008 COMMD5Q9GZQ3 224 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 RANGRFQ9HD47 186 aaPredicted RBP10.15□□□□□ -0.78
LINC00399-201ENST00000439008 PEF1Q9UBV8 284 aaKnown RBP10.15□□□□□ -0.78
LINC00399-201ENST00000439008 FBXL7Q9UJT9 491 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 OR51B2Q9Y5P1 312 aa10.15□□□□□ -0.78
LINC00399-201ENST00000439008 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.14□□□□□ -0.79
LINC00399-201ENST00000439008 MFSD2BA6NFX1 497 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 C15orf61A6NNL5 157 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 DISC1C4P0D8 188 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 PPP5D1E7EU14 171 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 HLA-AP01891 365 aaKnown RBP10.14□□□□□ -0.79
LINC00399-201ENST00000439008 TRAPPC2P0DI81 140 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 TRAPPC2BP0DI82 140 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 UCP1P25874 307 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 ETV6P41212 452 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 REC114Q7Z4M0 266 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 SLC25A42Q86VD7 318 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 Q8N402 240 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 OR1L8Q8NGR8 309 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 ZFAND1Q8TCF1 268 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 GLYATL2Q8WU03 294 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 PRR25Q96S07 402 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 SLC2A8Q9NY64 477 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 PRR13Q9NZ81 148 aa10.14□□□□□ -0.79
LINC00399-201ENST00000439008 A0A0B4J293 547 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 SERPINE2P07093 398 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 OR5AC1P0C628 307 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 OR13C7P0DN81 318 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 EDN2P20800 178 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 S100GP29377 79 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 SYNJ2BPP57105 145 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 ADAMTSL5Q6ZMM2 481 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 Q6ZRM9 215 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 H2BFWTQ7Z2G1 175 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 GDPD1Q8N9F7 314 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 HINT2Q9BX68 163 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 GPR61Q9BZJ8 451 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 SRRQ9GZT4 340 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 COPZ2Q9P299 210 aa10.13□□□□□ -0.79
LINC00399-201ENST00000439008 CRYM-AS1A6NIL9 109 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SAP30O75446 220 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SNAPC5O75971 98 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 S100A5P33763 92 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 ECI1P42126 302 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SUPT4H1P63272 117 aaKnown RBP10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SURF2Q15527 256 aaPredicted RBP10.12□□□□□ -0.79
LINC00399-201ENST00000439008 BAK1Q16611 211 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SPINK9Q5DT21 86 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 ZNF414Q96IQ9 312 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 PRRT1Q99946 306 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 SRSF8Q9BRL6 282 aaKnown RBP10.12□□□□□ -0.79
LINC00399-201ENST00000439008 TMEM222Q9H0R3 208 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 PRNDQ9UKY0 176 aa10.12□□□□□ -0.79
LINC00399-201ENST00000439008 DNAH9Q9NYC9 4486 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 F8W735 103 aaPredicted RBP10.11□□□□□ -0.79
LINC00399-201ENST00000439008 CDS2O95674 445 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 CSN3P07498 182 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 ZP3P21754 424 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 ZNF429Q86V71 674 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 CCDC71LQ8N9Z2 235 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 NAA60Q9H7X0 242 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 MCUBQ9NWR8 336 aa10.11□□□□□ -0.79
LINC00399-201ENST00000439008 F11RQ9Y624 299 aaKnown RBP10.11□□□□□ -0.79
LINC00399-201ENST00000439008 IGHV3-21A0A0B4J1V1 117 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 TEX13DA0A0J9YY54 714 aaPredicted RBP10.1□□□□□ -0.79
LINC00399-201ENST00000439008 OR2C1O95371 312 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 DEFA4P12838 97 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 SPNP16150 400 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 INSL3P51460 131 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 HSPE1P61604 102 aaKnown RBP10.1□□□□□ -0.79
LINC00399-201ENST00000439008 TMEM187Q14656 261 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 RPEL1Q2QD12 228 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 TRIM16LQ309B1 348 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 C11orf87Q6NUJ2 197 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 SELENOHQ8IZQ5 122 aaKnown RBP10.1□□□□□ -0.79
LINC00399-201ENST00000439008 OR9G4Q8NGQ1 327 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 OR5B3Q8NH48 314 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 ZNF502Q8TBZ5 544 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 LSM10Q969L4 123 aaKnown RBP10.1□□□□□ -0.79
LINC00399-201ENST00000439008 ZC4H2Q9NQZ6 224 aa10.1□□□□□ -0.79
LINC00399-201ENST00000439008 C14orf166Q9Y224 244 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms