RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 MS4A8Q9BY19 250 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 GABARAPL3Q9BY60 117 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 PARP12Q9H0J9 701 aaKnown RBP1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 TPK1Q9H3S4 243 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 CXorf21Q9HAI6 301 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 HRASLSQ9HDD0 168 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM60AQ9NP50 221 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 DYNLRB1Q9NP97 96 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 ACER3Q9NUN7 267 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 C14orf105Q9NVL8 296 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 TAS2R9Q9NYW1 312 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC23A2Q9UGH3 650 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 ENOPH1Q9UHY7 261 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 CD84Q9UIB8 345 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 FBXL3Q9UKT7 428 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 CES1P1Q9UKY3 287 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 FIS1Q9Y3D6 152 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 POLR3HQ9Y535 204 aaPredicted RBP1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 ASB4Q9Y574 426 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR51B2Q9Y5P1 312 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 HEBP2Q9Y5Z4 205 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 ENPP4Q9Y6X5 453 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 DSPPQ9NZW4 1301 aa1.33□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAV8-7A0A075B6U6 113 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGKV1-8A0A0C4DH67 115 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A0G2JN53 185 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A0G2JRQ6 117 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A1B0GVI7 797 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GNG14A0A1W2PPG7 69 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 A0A1W2PRG6 482 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 EFCAB10A6NFE3 127 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLDN24A6NM45 220 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 FTCDNL1E5RQL4 147 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 H7C2Y5 167 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 hCG_2039718K7EN88 272 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 M0R1B8 84 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TXNDC9O14530 226 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GNGT2O14610 69 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CRXO43186 299 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MPZL2O60487 215 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HPGDSO60760 199 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ADAP1O75689 374 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 EIF3GO75821 320 aaKnown RBP eCLIP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CPSF4O95639 269 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SNAP29O95721 258 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF682O95780 498 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 C6orf47O95873 294 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HPRT1P00492 218 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SERPINA1P01009 418 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 IGHMP01871 453 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ARG1P05089 322 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 FABP3P05413 133 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HTR1AP08908 422 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR5AL1P0C617 328 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR8U9P0C7N5 309 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CHTF8P0CG12 524 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 PIPP12273 146 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF14P17017 642 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CSNK2A2P19784 350 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB5AP20339 215 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HIST1H1TP22492 207 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CMPK1P30085 196 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GNRHRP30968 328 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MPIP34949 423 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 GGT2P36268 569 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 POLR2IP36954 125 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 IDH2P48735 452 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ERFP50548 548 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 DAPP51397 102 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ARPC4P59998 168 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 RAB14P61106 215 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SNRPGP62308 76 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TBPL1P62380 186 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 RPL31P62899 125 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HBA1P69905 142 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CDK6Q00534 326 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF92Q03936 586 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM53BQ14153 422 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 HES1Q14469 280 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 OR7A5Q15622 319 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 MOGQ16653 247 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TMEM176BQ3YBM2 270 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TPTE2P1Q5T6R2 138 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 XAF1Q6GPH4 301 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 THOC7Q6I9Y2 204 aaKnown RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SLC48A1Q6P1K1 146 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 DNM1P34Q6PK57 102 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 FAM19A1Q7Z5A9 133 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 LINC00596Q86U02 117 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 TRAPPC5Q8IUR0 188 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 BOD1L2Q8IYS8 172 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLECL1Q8IZS7 167 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 C8orf59Q8N0T1 100 aaPredicted RBP1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 Q8N402 240 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 SPICQ8N5J4 248 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 CLDN22Q8N7P3 220 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ACOT4Q8N9L9 421 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 WDR31Q8NA23 367 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 ZNF555Q8NEP9 628 aa1.32□□□□□ -2.2
HMGB1P18-201ENST00000438801 NPBQ8NG41 125 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms