RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 CYB5BO43169 146 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 RBMXL2O75526 392 aaKnown RBP12.66□□□□□ -0.38
CTSD-205ENST00000438213 IGKV1-39P01597 117 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 PRH1P02810 166 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 IGKV1D-39P04432 117 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 AREGP15514 252 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 HIST1H1BP16401 226 aaKnown RBP12.66□□□□□ -0.38
CTSD-205ENST00000438213 UCP1P25874 307 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 BEAN1Q3B7T3 259 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 TRIQKQ629K1 86 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 OR5B3Q8NH48 314 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 TMEM56Q96MV1 263 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 TMEM222Q9H0R3 208 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 NAA60Q9H7X0 242 aa12.66□□□□□ -0.38
CTSD-205ENST00000438213 CRYM-AS1A6NIL9 109 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 CGB1A6NKQ9 187 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 CTRB1P17538 263 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 AKR1C2P52895 323 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 FAM209BQ5JX69 171 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 KPRPQ5T749 579 aaPredicted RBP12.65□□□□□ -0.38
CTSD-205ENST00000438213 CTRB2Q6GPI1 263 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 ZNF343Q6P1L6 599 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 RRNAD1Q96FB5 475 aaKnown RBP12.65□□□□□ -0.38
CTSD-205ENST00000438213 SLC25A21Q9BQT8 299 aaPredicted RBP12.65□□□□□ -0.38
CTSD-205ENST00000438213 AKIP1Q9NQ31 210 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 NDUFA4L2Q9NRX3 87 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 TMEM14BQ9NUH8 114 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 ZMAT5Q9UDW3 170 aaKnown RBP12.65□□□□□ -0.38
CTSD-205ENST00000438213 FBXL7Q9UJT9 491 aa12.65□□□□□ -0.38
CTSD-205ENST00000438213 IGHV4OR15-8A0A075B7B6 117 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 A0A087WW49 117 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 IGLC7A0M8Q6 106 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 ANKRD34BA5PLL1 514 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 NAP1L6A6NFF2 107 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 OR2J3O76001 311 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 CDS2O95674 445 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 OR5AC1P0C628 307 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 OR13C7P0DN81 318 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 ZP3P21754 424 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 BAK1Q16611 211 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 LINC00299Q6ZSB3 139 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 RNASE11Q8TAA1 199 aaKnown RBP12.64□□□□□ -0.39
CTSD-205ENST00000438213 GLYATL2Q8WU03 294 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 LSM10Q969L4 123 aaKnown RBP12.64□□□□□ -0.39
CTSD-205ENST00000438213 THYN1Q9P016 225 aa12.64□□□□□ -0.39
CTSD-205ENST00000438213 PEF1Q9UBV8 284 aaKnown RBP12.64□□□□□ -0.39
CTSD-205ENST00000438213 CENPXA8MT69 81 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 REG1AP05451 166 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 AKR1C4P17516 323 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 MECP2P51608 486 aaKnown RBP12.63□□□□□ -0.39
CTSD-205ENST00000438213 HSPE1P61604 102 aaKnown RBP12.63□□□□□ -0.39
CTSD-205ENST00000438213 KLK9Q2XQG4 91 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 C15orf32Q32M92 178 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 C9orf66Q5T8R8 295 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 OR10W1Q8NGF6 305 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 DCUN1D4Q92564 292 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 BATF3Q9NR55 127 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 KLK9Q9UKQ9 250 aa12.63□□□□□ -0.39
CTSD-205ENST00000438213 SEC14L6B5MCN3 397 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 OVOL1O14753 267 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 IGKV1-5P01602 117 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 ANXA3P12429 323 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 SLURP1P55000 103 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 EXOSC2Q13868 293 aaKnown RBP12.62□□□□□ -0.39
CTSD-205ENST00000438213 TATDN3Q17R31 274 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 CNPY1Q3B7I2 92 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 ZNF429Q86V71 674 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 FAM219AQ8IW50 185 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 OR1L6Q8NGR2 347 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 DLX4Q92988 240 aaPredicted RBP12.62□□□□□ -0.39
CTSD-205ENST00000438213 RBPMSQ93062 196 aaKnown RBP12.62□□□□□ -0.39
CTSD-205ENST00000438213 GALNT14Q96FL9 552 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
CTSD-205ENST00000438213 PIGBOS1A0A0B4J2F0 54 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 INSL3P51460 131 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 DEFA5Q01523 94 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 TMEM128Q5BJH2 165 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 SLC25A24Q6NUK1 477 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 REC114Q7Z4M0 266 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 SELENOHQ8IZQ5 122 aaKnown RBP12.61□□□□□ -0.39
CTSD-205ENST00000438213 SDHCQ99643 169 aaPredicted RBP12.61□□□□□ -0.39
CTSD-205ENST00000438213 C7orf50Q9BRJ6 194 aaKnown RBP12.61□□□□□ -0.39
CTSD-205ENST00000438213 PDCD10Q9BUL8 212 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 TMEM56-RWDD3S4R434 201 aa12.61□□□□□ -0.39
CTSD-205ENST00000438213 IGLV11-55A0A075B6I3 123 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.6□□□□□ -0.39
CTSD-205ENST00000438213 A0A0B4J293 547 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 DBX1A6NMT0 343 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 NDUFB8O95169 186 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 IFNA17P01571 189 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 P0C879 139 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 HOXD3P31249 432 aaPredicted RBP12.6□□□□□ -0.39
CTSD-205ENST00000438213 SRPXP78539 464 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 ERHP84090 104 aaKnown RBP12.6□□□□□ -0.39
CTSD-205ENST00000438213 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 WT1-ASQ06250 92 aa12.6□□□□□ -0.39
CTSD-205ENST00000438213 RBMS2Q15434 407 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms