RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 PRNDQ9UKY0 176 aa8.85□□□□□ -0.99
COL28A1-203ENST00000435823 TEX13DA0A0J9YY54 714 aaPredicted RBP8.84□□□□□ -0.99
COL28A1-203ENST00000435823 A0A1B0GW64 132 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 ANKRD34BA5PLL1 514 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 E7EUB6 86 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 OVOL1O14753 267 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 CYB5BO43169 146 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 OR2J3O76001 311 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 CRYGCP07315 174 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TRAPPC2P0DI81 140 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TRAPPC2BP0DI82 140 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 AREGP15514 252 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 HIST1H1BP16401 226 aaKnown RBP8.84□□□□□ -0.99
COL28A1-203ENST00000435823 ETV6P41212 452 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 SLURP1P55000 103 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 ZNF45Q02386 682 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 ATP5G2Q06055 141 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 ZNF79Q15937 498 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TRIM16LQ309B1 348 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 C9orf66Q5T8R8 295 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 OR5B3Q8NH48 314 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 OR4A16Q8NH70 328 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 DCUN1D4Q92564 292 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TRIM63Q969Q1 353 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 MRGPRFQ96AM1 343 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 SEC22AQ96IW7 307 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 AKIP1Q9NQ31 210 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 PEF1Q9UBV8 284 aaKnown RBP8.84□□□□□ -0.99
COL28A1-203ENST00000435823 NSG2Q9Y328 171 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 OR51B2Q9Y5P1 312 aa8.84□□□□□ -0.99
COL28A1-203ENST00000435823 TRBV9A0A0B4J1U6 114 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 TEX50A0A1B0GTY4 177 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 CGB1A6NKQ9 187 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 SEC14L6B5MCN3 397 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 RBMXL2O75526 392 aaKnown RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 IGKV1-39P01597 117 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 IGKV1D-39P04432 117 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 REG1AP05451 166 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 CTRB1P17538 263 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 HOXD3P31249 432 aaPredicted RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 INPP1P49441 399 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 MECP2P51608 486 aaKnown RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 AKR1C2P52895 323 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 EXOSC2Q13868 293 aaKnown RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 KLF9Q13886 244 aaPredicted RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 PDLIM3Q53GG5 364 aaPredicted RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 FAM209BQ5JX69 171 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 CTRB2Q6GPI1 263 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 ZNF343Q6P1L6 599 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 RNASE11Q8TAA1 199 aaKnown RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 DEDD2Q8WXF8 326 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 DLX4Q92988 240 aaPredicted RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 TMEM56Q96MV1 263 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 RTBDNQ9BSG5 229 aaPredicted RBP8.83□□□□□ -1
COL28A1-203ENST00000435823 HINT2Q9BX68 163 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 SRRQ9GZT4 340 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 C5orf66Q9H5L9 145 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 NAA60Q9H7X0 242 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 FBXL7Q9UJT9 491 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 GPR132Q9UNW8 380 aa8.83□□□□□ -1
COL28A1-203ENST00000435823 IGLC7A0M8Q6 106 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 C15orf61A6NNL5 157 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 OR5AC1P0C628 307 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 UCP1P25874 307 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 INSL3P51460 131 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 DHODHQ02127 395 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 EGFEM1PQ0D2K5 195 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 C15orf32Q32M92 178 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 SP6Q3SY56 376 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 TRIQKQ629K1 86 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 ZNF57Q68EA5 555 aaPredicted RBP8.82□□□□□ -1
COL28A1-203ENST00000435823 C19orf35Q6ZS72 473 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 GDPD1Q8N9F7 314 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 RRNAD1Q96FB5 475 aaKnown RBP8.82□□□□□ -1
COL28A1-203ENST00000435823 AURKAIP1Q9NWT8 199 aaPredicted RBP8.82□□□□□ -1
COL28A1-203ENST00000435823 THYN1Q9P016 225 aa8.82□□□□□ -1
COL28A1-203ENST00000435823 IGLV11-55A0A075B6I3 123 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 KRTAP9-6A0A140TA67 174 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 CRYM-AS1A6NIL9 109 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 PRB2P02812 416 aaPredicted RBP8.81□□□□□ -1
COL28A1-203ENST00000435823 OR13C7P0DN81 318 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 TATDN3Q17R31 274 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 RPEL1Q2QD12 228 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 SGPP2Q8IWX5 399 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 OR10W1Q8NGF6 305 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 EEF1AKMT3Q96AZ1 226 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 FANCD2OSQ96PS1 177 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 PDCD10Q9BUL8 212 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 ELOVL1Q9BW60 279 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 TMEM222Q9H0R3 208 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 NDUFA4L2Q9NRX3 87 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 TMEM14BQ9NUH8 114 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 KCNIP3Q9Y2W7 256 aa8.81□□□□□ -1
COL28A1-203ENST00000435823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.8□□□□□ -1
COL28A1-203ENST00000435823 SAP30O75446 220 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 NDUFB8O95169 186 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 IGKV1-5P01602 117 aa8.8□□□□□ -1
COL28A1-203ENST00000435823 HSPE1P61604 102 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms