RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 C5orf49A4QMS7 147 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 CA6P23280 308 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM249Q2WGJ8 235 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 PQLC2Q6ZP29 291 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 FGFBP3Q8TAT2 258 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 TNFRSF14Q92956 283 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 LOXL2Q9Y4K0 774 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 TIMM9Q9Y5J7 89 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 CHD9Q3L8U1 2897 aa6.26□□□□□ -1.41
CPSF6-202ENST00000435070 PPIAL4DF5H284 164 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 TIAF1O95411 115 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 CAMPP49913 170 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 RTL8BQ17RB0 113 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 CHRDL1Q9BU40 450 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 ZIC3O60481 467 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 CAPZBP47756 277 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 RPL8P62917 257 aaKnown RBP6.25□□□□□ -1.41
CPSF6-202ENST00000435070 OR10AG1Q8NH19 301 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SSBP4Q9BWG4 385 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-202ENST00000435070 A0A1B0GX78 115 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SMPD2O60906 423 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF415Q09FC8 603 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SPATA12Q7Z6I5 190 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 WDR31Q8NA23 367 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 OR4S2Q8NH73 311 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 OR13C6PQ8NH95 151 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 PLPPR2Q96GM1 343 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 FRYLO94915 3013 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 APCSP02743 223 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 CTXN2P0C2S0 81 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 RHOGP84095 191 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM136Q6ZRR5 245 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 PNKDQ8N490 385 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM251Q8N6I4 163 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 OR1L3Q8NH93 324 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SFXN3Q9BWM7 321 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 FER1L5A0AVI2 2057 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 LINC00271P0C7V0 271 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 HIST3H3Q16695 136 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 LSM10Q969L4 123 aaKnown RBP6.25□□□□□ -1.41
CPSF6-202ENST00000435070 C10orf35Q96D05 121 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 FZR1Q9UM11 496 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 PIAS2O75928 621 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 CRYBB3P26998 211 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 SLAQ13239 276 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 BVES-AS1Q5T3Y7 98 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 OR1B1Q8NGR6 318 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 EAF1Q96JC9 268 aaPredicted RBP6.25□□□□□ -1.41
CPSF6-202ENST00000435070 S1PR3Q99500 378 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 WDR54Q9H977 334 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 FGF21Q9NSA1 209 aa6.25□□□□□ -1.41
CPSF6-202ENST00000435070 KLK10O43240 276 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 FOXH1O75593 365 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 HAND1O96004 215 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 COX6CP09669 75 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 CD24P25063 80 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 GPR12P47775 334 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 TM4SF4P48230 202 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 CLDN15P56746 228 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 CENPWQ5EE01 88 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 LINC00173Q6ZV60 143 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 MOB3BQ86TA1 216 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF441Q8N8Z8 693 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 FSCN3Q9NQT6 498 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 REV3LO60673 3130 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 CD27P26842 260 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SMIM21Q3B7S5 101 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 FER1L6-AS1Q8NA97 138 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SPACA9Q96E40 222 aaPredicted RBP6.24□□□□□ -1.41
CPSF6-202ENST00000435070 LOC107984156A0A0G2JMH3 177 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 ADH4P08319 380 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 FAM87AP0C7U9 286 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 DLX1P56177 255 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 RNPS1Q15287 305 aaKnown RBP6.24□□□□□ -1.41
CPSF6-202ENST00000435070 ARL17AQ8IVW1 177 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 DRAM1Q8N682 238 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 V9GYV3 84 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 A0A1B0GW15 77 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF785A8K8V0 405 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 NBEAP1P0C6P0 100 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 GNG4P50150 75 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 FOXA3P55318 350 aaPredicted RBP6.24□□□□□ -1.41
CPSF6-202ENST00000435070 PRAMEF5Q5TYX0 476 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 PRAMEF6Q5VXH4 476 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SLC23A3Q6PIS1 610 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 TMEM186Q96B77 213 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 GTSF1LQ9H1H1 148 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 PRUNE2Q8WUY3 3088 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 hCG_38984A0A1B0GV85 526 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 MFAP2P55001 183 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 HERVK_113P61574 105 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SMAGPQ0VAQ4 97 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 C18orf32Q8TCD1 76 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 ZNF714Q96N38 554 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 LRRC61Q9BV99 259 aa6.24□□□□□ -1.41
CPSF6-202ENST00000435070 SPRY3O43610 288 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms