RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 QTRT1Q9BXR0 403 aaKnown RBP11.72□□□□□ -0.53
PTCD1-204ENST00000430982 AKIP1Q9NQ31 210 aa11.72□□□□□ -0.53
PTCD1-204ENST00000430982 SCP2D1Q9UJQ7 156 aa11.72□□□□□ -0.53
PTCD1-204ENST00000430982 OR51B2Q9Y5P1 312 aa11.72□□□□□ -0.53
PTCD1-204ENST00000430982 TEX50A0A1B0GTY4 177 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 FAM223BA6NKX1 122 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 SEC14L6B5MCN3 397 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TRAPPC2P0DI81 140 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TRAPPC2BP0DI82 140 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 FAUP35544 74 aaKnown RBP11.71□□□□□ -0.53
PTCD1-204ENST00000430982 AP3S2P59780 193 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 ATP5G2Q06055 141 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 KLF9Q13886 244 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-204ENST00000430982 SURF2Q15527 256 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TRIM16LQ309B1 348 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 SP6Q3SY56 376 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 DEFB121Q5J5C9 76 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 FAM223AQ8IWN6 122 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TOMM5Q8N4H5 51 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 OR1L8Q8NGR8 309 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 DCUN1D4Q92564 292 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 SEC22AQ96IW7 307 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TSC22D3Q99576 134 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 RTBDNQ9BSG5 229 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-204ENST00000430982 PRNDQ9UKY0 176 aa11.71□□□□□ -0.53
PTCD1-204ENST00000430982 TNCP24821 2201 aa11.71□□□□□ -0.54
PTCD1-204ENST00000430982 LYSTQ99698 3801 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 TEX13DA0A0J9YY54 714 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-204ENST00000430982 OVOL1O14753 267 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 DHFRP00374 187 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 CRYGCP07315 174 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 FGF2P09038 288 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 DEFA4P12838 97 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 ETV6P41212 452 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 EXOSC2Q13868 293 aaKnown RBP11.7□□□□□ -0.54
PTCD1-204ENST00000430982 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 CADM3Q8N126 398 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 NECAP1Q8NC96 275 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 OR4A16Q8NH70 328 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 DLX4Q92988 240 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-204ENST00000430982 C5orf66Q9H5L9 145 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 NAA60Q9H7X0 242 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 RANGRFQ9HD47 186 aaPredicted RBP11.7□□□□□ -0.54
PTCD1-204ENST00000430982 SLC2A8Q9NY64 477 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 FBXL7Q9UJT9 491 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 GPR132Q9UNW8 380 aa11.7□□□□□ -0.54
PTCD1-204ENST00000430982 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 C3orf84H3BNL1 204 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 CTRB1P17538 263 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 AKR1C2P52895 323 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 ZNF57Q68EA5 555 aaPredicted RBP11.69□□□□□ -0.54
PTCD1-204ENST00000430982 CTRB2Q6GPI1 263 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 THOC7Q6I9Y2 204 aaKnown RBP11.69□□□□□ -0.54
PTCD1-204ENST00000430982 ZNF343Q6P1L6 599 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 OR10W1Q8NGF6 305 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 SCGB3A2Q96PL1 93 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 SRSF8Q9BRL6 282 aaKnown RBP11.69□□□□□ -0.54
PTCD1-204ENST00000430982 SRRQ9GZT4 340 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 FKBP11Q9NYL4 201 aa11.69□□□□□ -0.54
PTCD1-204ENST00000430982 PEF1Q9UBV8 284 aaKnown RBP11.69□□□□□ -0.54
PTCD1-204ENST00000430982 DBX1A6NMT0 343 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 C15orf61A6NNL5 157 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 B3GALNT1O75752 331 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 ATG12O94817 140 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 NDUFB8O95169 186 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 IGKV1-5P01602 117 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 TRBV12-3P01733 135 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 OR5AC1P0C628 307 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 OR13C7P0DN81 318 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 ZP3P21754 424 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 UCP1P25874 307 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 INPP1P49441 399 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 MECP2P51608 486 aaKnown RBP11.68□□□□□ -0.54
PTCD1-204ENST00000430982 IZUMO4Q1ZYL8 232 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 GDPD1Q8N9F7 314 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 RNASE11Q8TAA1 199 aaKnown RBP11.68□□□□□ -0.54
PTCD1-204ENST00000430982 LSM10Q969L4 123 aaKnown RBP11.68□□□□□ -0.54
PTCD1-204ENST00000430982 FANCD2OSQ96PS1 177 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 NDUFA4L2Q9NRX3 87 aa11.68□□□□□ -0.54
PTCD1-204ENST00000430982 CRYM-AS1A6NIL9 109 aa11.67□□□□□ -0.54
PTCD1-204ENST00000430982 HIST1H1BP16401 226 aaKnown RBP11.67□□□□□ -0.54
PTCD1-204ENST00000430982 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
PTCD1-204ENST00000430982 HSD17B13Q7Z5P4 300 aaPredicted RBP11.67□□□□□ -0.54
PTCD1-204ENST00000430982 OR5B3Q8NH48 314 aa11.67□□□□□ -0.54
PTCD1-204ENST00000430982 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
PTCD1-204ENST00000430982 S4R3C0 116 aa11.67□□□□□ -0.54
PTCD1-204ENST00000430982 SAP30O75446 220 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 IGHV3-23P01764 117 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 NHLRC4P0CG21 123 aaPredicted RBP11.66□□□□□ -0.54
PTCD1-204ENST00000430982 DHODHQ02127 395 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 WT1-ASQ06250 92 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 SGPP2Q8IWX5 399 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 RRNAD1Q96FB5 475 aaKnown RBP11.66□□□□□ -0.54
PTCD1-204ENST00000430982 TMEM56Q96MV1 263 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 TMEM222Q9H0R3 208 aa11.66□□□□□ -0.54
PTCD1-204ENST00000430982 HUWE1Q7Z6Z7 4374 aaKnown RBP11.65□□□□□ -0.54
PTCD1-204ENST00000430982 IGLV11-55A0A075B6I3 123 aa11.65□□□□□ -0.54
PTCD1-204ENST00000430982 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms