RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 SMIM8Q96KF7 97 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 SSX3Q99909 188 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 FBXL17Q9UF56 701 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 NUP50Q9UKX7 468 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 PRNDQ9UKY0 176 aa7.06□□□□□ -1.28
SMC6-204ENST00000428868 PMS2P5A8MQ11 134 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 TEX22C9J3V5 150 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 CD5LO43866 347 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 MED6O75586 246 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 SPDEFO95238 335 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 IGHV4-59P01825 116 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 FGF2P09038 288 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 FBP1P09467 338 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 BRS3P32247 399 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 WT1-ASQ06250 92 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 OR2F1Q13607 317 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 PLGLAQ15195 96 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 C5orf64Q2M2E5 130 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 LRRC75BQ2VPJ9 315 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 TMEM14EPQ6UXP3 125 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 PPP1R27Q86WC6 154 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 INO80EQ8NBZ0 244 aaPredicted RBP7.05□□□□□ -1.28
SMC6-204ENST00000428868 OR4A5Q8NH83 315 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 VSTM2AQ8TAG5 236 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 RAB40CQ96S21 281 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 RNF5Q99942 180 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 FAM103A1Q9BTL3 118 aaKnown RBP7.05□□□□□ -1.28
SMC6-204ENST00000428868 NDUFA4L2Q9NRX3 87 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 ZFP57Q9NU63 452 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 FBXO7Q9Y3I1 522 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 RFNGQ9Y644 331 aa7.05□□□□□ -1.28
SMC6-204ENST00000428868 A0A0D9SG52 128 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 IGLC7A0M8Q6 106 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 A6NDX4 124 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 NCBP2LA6PVI3 153 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 AMY1AP04745 511 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 AREGP15514 252 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 RPL27AP46776 148 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 COMPP49747 757 aaPredicted RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 DYNLT3P51808 116 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 RPL23AP62750 156 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 CLINT1Q14677 625 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 RPL7L1Q6DKI1 246 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 TMEM217Q8N7C4 229 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 OR1L8Q8NGR8 309 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 NANPQ8TBE9 248 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 SRSF12Q8WXF0 261 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 AIFM2Q9BRQ8 373 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 SLC25A33Q9BSK2 321 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 COMMD5Q9GZQ3 224 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 PLEKHA3Q9HB20 300 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 HEYLQ9NQ87 328 aaPredicted RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 ZC4H2Q9NQZ6 224 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 YAE1D1Q9NRH1 226 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 KIAA1456Q9P272 454 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 PAIP2BQ9ULR5 123 aaKnown RBP7.04□□□□□ -1.28
SMC6-204ENST00000428868 ZNF257Q9Y2Q1 563 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 FAM96BQ9Y3D0 163 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 WSB1Q9Y6I7 421 aa7.04□□□□□ -1.28
SMC6-204ENST00000428868 IGHV7-81A0A0B4J1V7 117 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 LINC01548A6NM66 108 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 PRSS46E5RG02 174 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 FBXO24O75426 580 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 FAM106CPP0CH98 169 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 RNASE2P10153 161 aaKnown RBP7.03□□□□□ -1.28
SMC6-204ENST00000428868 NUP62P37198 522 aaPredicted RBP7.03□□□□□ -1.28
SMC6-204ENST00000428868 MFAP2P55001 183 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 TAS2R30P59541 319 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 BSXQ3C1V8 233 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 ASPHD1Q5U4P2 390 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 OR8G2PQ6IF36 304 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 SPNS3Q6ZMD2 512 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 Q6ZS46 218 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 C9orf139Q6ZV77 190 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 C5orf56Q8N8D9 126 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 OR5C1Q8NGR4 320 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 OR5B3Q8NH48 314 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 RBM14Q96PK6 669 aaKnown RBP7.03□□□□□ -1.28
SMC6-204ENST00000428868 ARPC5LQ9BPX5 153 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 ZNF471Q9BX82 626 aaPredicted RBP7.03□□□□□ -1.28
SMC6-204ENST00000428868 TNFRSF19Q9NS68 423 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 DMRT1Q9Y5R6 373 aa7.03□□□□□ -1.28
SMC6-204ENST00000428868 KANTRA0A1W2PQU2 76 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 LY6G6DO95868 133 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 IFNA10P01566 189 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 EGR2P11161 476 aaPredicted RBP7.02□□□□□ -1.29
SMC6-204ENST00000428868 MAS1LP35410 378 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 IER3P46695 156 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 SULT1A1P50225 295 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 CX3CL1P78423 397 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 FXYD3Q14802 87 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 TUSC1Q2TAM9 212 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 Q71RC1 249 aaPredicted RBP7.02□□□□□ -1.29
SMC6-204ENST00000428868 SLC24A4Q8NFF2 622 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 SSMEM1Q8WWF3 244 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 ST8SIA2Q92186 375 aa7.02□□□□□ -1.29
SMC6-204ENST00000428868 CIB3Q96Q77 187 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 764.3 ms