RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 DEFB128Q7Z7B8 93 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 PHF13Q86YI8 300 aaPredicted RBP0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 PACRGLQ8N7B6 248 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 TMEM161BQ8NDZ6 487 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 OR4D11Q8NGI4 311 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 OR4C6Q8NH72 309 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 RNASE6Q93091 150 aaKnown RBP0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 BBS2Q9BXC9 721 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 COMMD5Q9GZQ3 224 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 NKIRAS1Q9NYS0 192 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 CKLFQ9UBR5 152 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 BAIAP2Q9UQB8 552 aa0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 SCAF11Q99590 1463 aaKnown RBP0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 DICER1Q9UPY3 1922 aaKnown RBP0.46□□□□□ -2.34
TIMM9P3-201ENST00000428659 KIF15Q9NS87 1388 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SLX4Q8IY92 1834 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 PCDH15Q96QU1 1955 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 TRBV20OR9-2A0A075B6H5 130 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 A0A0D9SG52 128 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SMIM23A6NLE4 172 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 F5H768 121 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 M0QZ92 97 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 ACOX3O15254 700 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 HCRTO43612 131 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 NDUFS6O75380 124 aaKnown RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 DCTN3O75935 186 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 DEXIO95424 95 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 NSA2O95478 260 aaKnown RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 HLA-DRAP01903 254 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 PRM2P04554 102 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 RPS4Y1P22090 263 aaKnown RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 HLA-DMBP28068 263 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 UBE2G2P60604 165 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 CCL20P78556 96 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 NUMA1Q14980 2115 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 TNFAIP8L3Q5GJ75 292 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 COQ5Q5HYK3 327 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SPANXN3Q5MJ09 141 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 C10orf55Q5SWW7 151 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 C1orf194Q5T5A4 169 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 FAM27BQ5VT28 67 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 LPCAT4Q643R3 524 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 RPL22L1Q6P5R6 122 aaKnown RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 IQCF2Q8IXL9 164 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 Q8N2B8 174 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 FAM19A2Q8N3H0 131 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SGMS2Q8NHU3 365 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 RASSF5Q8WWW0 418 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 LINC00526Q96FQ7 95 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 CNBD2Q96M20 576 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SCGB3A1Q96QR1 104 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 GINS4Q9BRT9 223 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 MRPS26Q9BYN8 205 aaKnown RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 REG4Q9BYZ8 158 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 MIXL1Q9H2W2 232 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 PAQR5Q9NXK6 330 aaPredicted RBP0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 IL36BQ9NZH7 164 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 LHFPL6Q9Y693 200 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 ROS1P08922 2347 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 DCCP43146 1447 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 C9orf84Q5VXU9 1444 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 SCN9AQ15858 1988 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 TONSLQ96HA7 1378 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 PIK3R4Q99570 1358 aa0.45□□□□□ -2.34
TIMM9P3-201ENST00000428659 IBA57-AS1B1ANH7 110 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 KCNK1O00180 336 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 LST1O00453 97 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 CETN3O15182 167 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 HYPMO75409 117 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 TCL1BO95988 128 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 IFNA10P01566 189 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 ISG15P05161 165 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 HTR1AP08908 422 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 DEFA4P12838 97 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 CCL5P13501 91 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 BRS3P32247 399 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 ZNF80P51504 273 aaPredicted RBP0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 BLVRAP53004 296 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 TNFAIP6P98066 277 aaPredicted RBP0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 RUNX1Q01196 453 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 MLLT11Q13015 90 aaPredicted RBP0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 KCNJ8Q15842 424 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 SAPCD1Q5SSQ6 148 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 CCDC122Q5T0U0 273 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 C1orf195Q5TG92 126 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 LPCAT3Q6P1A2 487 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 ZNF550Q7Z398 422 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 GID4Q8IVV7 300 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 C1orf158Q8N1D5 194 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 ZNF565Q8N9K5 539 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 ZNF439Q8NDP4 499 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 OR4E2Q8NGC2 313 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 C4orf3Q8WVX3 66 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 AQP3Q92482 292 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 RAB8BQ92930 207 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 OPTNQ96CV9 577 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 OR52E6Q96RD3 313 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 EFCAB1Q9HAE3 211 aa0.44□□□□□ -2.34
TIMM9P3-201ENST00000428659 IMP3Q9NV31 184 aaKnown RBP0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms