RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
TMEM248-204ENST00000424964 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
TMEM248-204ENST00000424964 TMEM14BQ9NUH8 114 aa11.52□□□□□ -0.57
TMEM248-204ENST00000424964 ZNF257Q9Y2Q1 563 aa11.52□□□□□ -0.57
TMEM248-204ENST00000424964 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 A0A0G2JLM5 398 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 C13orf42A0A1B0GVH6 325 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 DBX1A6NMT0 343 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 NPIPB5A8MRT5 1133 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 CCL24O00175 119 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 DEFA4P12838 97 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 PSMB6P28072 239 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 MYCNOSP40205 109 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 MECP2P51608 486 aaKnown RBP11.51□□□□□ -0.57
TMEM248-204ENST00000424964 THOC7Q6I9Y2 204 aaKnown RBP11.51□□□□□ -0.57
TMEM248-204ENST00000424964 LGI3Q8N145 548 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 OR5B3Q8NH48 314 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 TMEM56Q96MV1 263 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 NDUFA4L2Q9NRX3 87 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 FLVCR2Q9UPI3 526 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 TMEM56-RWDD3S4R434 201 aa11.51□□□□□ -0.57
TMEM248-204ENST00000424964 A0A0B4J293 547 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 A0A0G2JRQ6 117 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 UPK1BO75841 260 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 BRI3O95415 125 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 DHFRP00374 187 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 P0C879 139 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 OR13C7P0DN81 318 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 CTRB1P17538 263 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 SRPXP78539 464 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 RHOGP84095 191 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 DEFA5Q01523 94 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 CTRB2Q6GPI1 263 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 MZT2BQ6NZ67 158 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 C19orf35Q6ZS72 473 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 FAM219AQ8IW50 185 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 DPF1Q92782 380 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 IL22RA2Q969J5 263 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 RAX2Q96IS3 184 aa11.5□□□□□ -0.57
TMEM248-204ENST00000424964 I3L521 148 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 SFT2D2O95562 160 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 IFNA17P01571 189 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 CRYGCP07315 174 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 LGALS1P09382 135 aaKnown RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 CD33P20138 364 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 RAB25P57735 213 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 UBE2MP61081 183 aaKnown RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 RUNX1Q01196 453 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 PPP1R1AQ13522 171 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 HSD17B13Q7Z5P4 300 aaPredicted RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 SLC35G3Q8N808 338 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 OR11H1Q8NG94 326 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 OR1N2Q8NGR9 330 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 LSM10Q969L4 123 aaKnown RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 GPR146Q96CH1 333 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 USMG5Q96IX5 58 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 PDCD10Q9BUL8 212 aa11.49□□□□□ -0.57
TMEM248-204ENST00000424964 ALX4Q9H161 411 aaPredicted RBP11.49□□□□□ -0.57
TMEM248-204ENST00000424964 PIGBOS1A0A0B4J2F0 54 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 FAM240BA0A1B0GVZ2 78 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 ST8SIA3O43173 380 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 OR2J3O76001 311 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 TCRBP04435 133 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 ANXA7P20073 488 aaKnown RBP11.48□□□□□ -0.57
TMEM248-204ENST00000424964 ATP5G2Q06055 141 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 WT1-ASQ06250 92 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 SPINK9Q5DT21 86 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 Q6ZRM9 215 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 LYZL2Q7Z4W2 148 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 ZNF429Q86V71 674 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 NECAP1Q8NC96 275 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 P2RX4Q99571 388 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.48□□□□□ -0.57
TMEM248-204ENST00000424964 FBXL7Q9UJT9 491 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 TBC1D24Q9ULP9 559 aa11.48□□□□□ -0.57
TMEM248-204ENST00000424964 TRBV9A0A0B4J1U6 114 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 A0A0B4J2A0 478 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 C9orf170A2RU37 121 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 ANKRD34BA5PLL1 514 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 CYB5BO43169 146 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
TMEM248-204ENST00000424964 HIST1H1BP16401 226 aaKnown RBP11.47□□□□□ -0.57
TMEM248-204ENST00000424964 PRCDQ00LT1 54 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 ASAH1Q13510 395 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 ANKRD55Q3KP44 614 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 C4orf46Q504U0 113 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 C20orf85Q9H1P6 137 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 PLEKHA3Q9HB20 300 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 CACNG5Q9UF02 275 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 SHPKQ9UHJ6 478 aa11.47□□□□□ -0.57
TMEM248-204ENST00000424964 TRAV6A0A075B6T7 132 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms