RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 TRAPPC2P0DI81 140 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 TRAPPC2BP0DI82 140 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 H2BFWTQ7Z2G1 175 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 CADM3Q8N126 398 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 OR10W1Q8NGF6 305 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 OR51S1Q8NGJ8 323 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 OR1L8Q8NGR8 309 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 FANCD2OSQ96PS1 177 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 PRRT1Q99946 306 aa17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 SRSF8Q9BRL6 282 aaKnown RBP17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 THAP7Q9BT49 309 aaPredicted RBP17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 ZMAT5Q9UDW3 170 aaKnown RBP17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 C14orf166Q9Y224 244 aaKnown RBP17.15■□□□□ 0.34
PTCHD3P2-201ENST00000424937 C15orf61A6NNL5 157 aa17.14■□□□□ 0.33
PTCHD3P2-201ENST00000424937 INSL3P51460 131 aa17.14■□□□□ 0.33
PTCHD3P2-201ENST00000424937 MCUBQ9NWR8 336 aa17.14■□□□□ 0.33
PTCHD3P2-201ENST00000424937 PRNDQ9UKY0 176 aa17.14■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TGP01266 2768 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 NDUFB8O95169 186 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 HIST1H1BP16401 226 aaKnown RBP17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SURF2Q15527 256 aaPredicted RBP17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 ZNF79Q15937 498 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 RPEL1Q2QD12 228 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 ACSM6Q6P461 480 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 CCDC190Q86UF4 302 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 ZNF429Q86V71 674 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SORL1Q92673 2214 aa17.13■□□□□ 0.33
PTCHD3P2-201ENST00000424937 IGLV11-55A0A075B6I3 123 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 DBX1A6NMT0 343 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 AKR1C2P52895 323 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TRIM16LQ309B1 348 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SP6Q3SY56 376 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 Q8N402 240 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 OR5B3Q8NH48 314 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 OR4A16Q8NH70 328 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 LSM10Q969L4 123 aaKnown RBP17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TRIM63Q969Q1 353 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 NDUFA4L2Q9NRX3 87 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TMEM14BQ9NUH8 114 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SLC2A8Q9NY64 477 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 FKBP11Q9NYL4 201 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SCP2D1Q9UJQ7 156 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 S4R3C0 116 aa17.12■□□□□ 0.33
PTCHD3P2-201ENST00000424937 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 BMPR1BO00238 502 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 IGHV3-23P01764 117 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 OR13C7P0DN81 318 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 MECP2P51608 486 aaKnown RBP17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SYNJ2BPP57105 145 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 WT1-ASQ06250 92 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 HSD17B13Q7Z5P4 300 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 GDPD1Q8N9F7 314 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 RTBDNQ9BSG5 229 aaPredicted RBP17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 C5orf66Q9H5L9 145 aa17.11■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TEX13DA0A0J9YY54 714 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 IGKV1-5P01602 117 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 KLF5Q13887 457 aaPredicted RBP17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 KLK9Q2XQG4 91 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 SPANXN2Q5MJ10 180 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 EEF1AKMT3Q96AZ1 226 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 OR4C12Q96R67 309 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 PRR25Q96S07 402 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 ELOVL1Q9BW60 279 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 NAA60Q9H7X0 242 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 KLK9Q9UKQ9 250 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 GPR132Q9UNW8 380 aa17.1■□□□□ 0.33
PTCHD3P2-201ENST00000424937 PPP5D1E7EU14 171 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 B3GALNT1O75752 331 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 ATG12O94817 140 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 LY86O95711 162 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 OR5AC1P0C628 307 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 UCP1P25874 307 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 FAUP35544 74 aaKnown RBP17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 AP3S2P59780 193 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 KLF9Q13886 244 aaPredicted RBP17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 IZUMO4Q1ZYL8 232 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 FAM209BQ5JX69 171 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TOMM5Q8N4H5 51 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 CCDC140Q96MF4 163 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 TMEM56Q96MV1 263 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 NDUFA13Q9P0J0 144 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 DMRT1Q9Y5R6 373 aa17.09■□□□□ 0.33
PTCHD3P2-201ENST00000424937 MFSD2BA6NFX1 497 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 CYB5BO43169 146 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 TATDN3Q17R31 274 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 DEFB121Q5J5C9 76 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 HAPLN4Q86UW8 402 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 OR9G4Q8NGQ1 327 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 OR6Q1Q8NGQ2 317 aa17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 RNASE11Q8TAA1 199 aaKnown RBP17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 ZNF256Q9Y2P7 627 aaPredicted RBP17.08■□□□□ 0.32
PTCHD3P2-201ENST00000424937 CRYM-AS1A6NIL9 109 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 ETV6P41212 452 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 CLEC19AQ6UXS0 136 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 CXorf58Q96LI9 332 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 TMEM222Q9H0R3 208 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 THYN1Q9P016 225 aa17.07■□□□□ 0.32
PTCHD3P2-201ENST00000424937 HLA-AP01891 365 aaKnown RBP17.06■□□□□ 0.32
PTCHD3P2-201ENST00000424937 P0C879 139 aa17.06■□□□□ 0.32
PTCHD3P2-201ENST00000424937 ARL3P36405 182 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms