RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 IGHV3-21A0A0B4J1V1 117 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 EGR2P11161 476 aaPredicted RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 RPL27AP46776 148 aaKnown RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 ZNF329Q86UD4 541 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 SPIN2AQ99865 258 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 SPIN2BQ9BPZ2 258 aa10.61□□□□□ -0.71
PRPF39-202ENST00000424478 FOXA2Q9Y261 457 aaPredicted RBP10.61□□□□□ -0.71
PRPF39-202ENST00000424478 FXYD6-FXYD2A0A087WZ82 144 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 MPC2O95563 127 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 AP2S1P53680 142 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-202ENST00000424478 ARSJQ5FYB0 599 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-202ENST00000424478 ARPC1AQ92747 370 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 RNF5Q99942 180 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 RNF126Q9BV68 326 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 PRNDQ9UKY0 176 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 S4R3C0 116 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 SPDEFO95238 335 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 OR13C7P0DN81 318 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 HSPE1P61604 102 aaKnown RBP10.6□□□□□ -0.71
PRPF39-202ENST00000424478 ID3Q02535 119 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 AANATQ16613 207 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 ASPHD1Q5U4P2 390 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 HEYLQ9NQ87 328 aaPredicted RBP10.6□□□□□ -0.71
PRPF39-202ENST00000424478 HSPB7Q9UBY9 170 aa10.6□□□□□ -0.71
PRPF39-202ENST00000424478 TEX22C9J3V5 150 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 SYNGR2O43760 224 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 GIPP09681 153 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-202ENST00000424478 PSMB6P28072 239 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 HILS1P60008 231 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 TMEM267Q0VDI3 215 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-202ENST00000424478 DTD1Q8TEA8 209 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 NMES1Q9C002 83 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 TRIM77I1YAP6 450 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 PAX9P55771 341 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 UBA52P62987 128 aaKnown RBP10.59□□□□□ -0.71
PRPF39-202ENST00000424478 SPANXN5Q5MJ07 72 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 BSCL2Q96G97 398 aaPredicted RBP10.59□□□□□ -0.71
PRPF39-202ENST00000424478 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 FAM24AA6NFZ4 105 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 HLA-DRB1P01911 266 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 ZNF562Q6V9R5 426 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 OR1L8Q8NGR8 309 aa10.59□□□□□ -0.71
PRPF39-202ENST00000424478 IGLC7A0M8Q6 106 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 CAV2P51636 162 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 SLC35E3Q7Z769 313 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 ZNF429Q86V71 674 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 MS4A10Q96PG2 267 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 ZNF702PQ9H963 129 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 PLEKHA3Q9HB20 300 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 POMT1Q9Y6A1 747 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 COL6A5A8TX70 2615 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 TRAPPC2P0DI81 140 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 TRAPPC2BP0DI82 140 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 PRCDQ00LT1 54 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 MLANAQ16655 118 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 C11orf44Q8N8P7 122 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 OR8H1Q8NGG4 311 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 DCUN1D4Q92564 292 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 COA4Q9NYJ1 87 aa10.58□□□□□ -0.72
PRPF39-202ENST00000424478 STAB1Q9NY15 2570 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 FGF16O43320 207 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 SOX15O60248 233 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 CST7O76096 145 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 SPCS3P61009 180 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 RAP2BP61225 183 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 UNQ5815/PRO19632Q6UWF5 114 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 ARPC5O15511 151 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 METTL15P1P0C7V9 234 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 MFAP2P55001 183 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 Q6ZSV7 163 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 TMEM217Q8N7C4 229 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 OR4A5Q8NH83 315 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 DMRT1Q9Y5R6 373 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 A0A1W2PN81 502 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 DEDDO75618 318 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 SLC25A6P12236 298 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 CHRNA7P36544 502 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
PRPF39-202ENST00000424478 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
PRPF39-202ENST00000424478 TCF21O43680 179 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 IFNA10P01566 189 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 FGF2P09038 288 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 OR8G2PQ6IF36 304 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 OR5B3Q8NH48 314 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 PINX1Q96BK5 328 aaKnown RBP10.56□□□□□ -0.72
PRPF39-202ENST00000424478 SMIM3Q9BZL3 60 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 PSENENQ9NZ42 101 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 HAX1O00165 279 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 NHLH2Q02577 135 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 SRSF4Q08170 494 aaKnown RBP10.56□□□□□ -0.72
PRPF39-202ENST00000424478 NPFFR1Q9GZQ6 430 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
PRPF39-202ENST00000424478 IGSF23A1L1A6 192 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 L7N2F9 121 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 VAMP2P63027 116 aa10.55□□□□□ -0.72
PRPF39-202ENST00000424478 CYCSP99999 105 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms