RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 PPIHO43447 177 aaKnown RBP9.72□□□□□ -0.85
PTPRN-204ENST00000423636 NPY1RP25929 384 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 B2MP61769 119 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 PNKDQ8N490 385 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 LAMP3Q9UQV4 416 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
PTPRN-204ENST00000423636 IGKV1OR2-108A0A075B7D4 117 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 F2RL2O00254 374 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 CGB3P0DN86 165 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 CGB7P0DN87 165 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 FAM78BQ5VT40 261 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 MIR17HGQ75NE6 70 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 MRGPRGQ86SM5 289 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 Q8N7P7 452 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 SLC24A4Q8NFF2 622 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 ACTR3CQ9C0K3 210 aaPredicted RBP9.72□□□□□ -0.85
PTPRN-204ENST00000423636 NIT2Q9NQR4 276 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 SCO2A0A1W2PP80 73 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 SHISA9B4DS77 424 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 TNFRSF1AP19438 455 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 VDAC2P45880 294 aaPredicted RBP9.72□□□□□ -0.85
PTPRN-204ENST00000423636 SPCS3P61009 180 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 RHEBQ15382 184 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 MORN5Q5VZ52 161 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 HEPN1Q6WQI6 88 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 OR10A7Q8NGE5 316 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 ZNF714Q96N38 554 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 PCGF1Q9BSM1 259 aa9.72□□□□□ -0.85
PTPRN-204ENST00000423636 TMEM178BH3BS89 294 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 K7ENP7 123 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 SERF2P84101 59 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 DMRTC2Q8IXT2 367 aaPredicted RBP9.71□□□□□ -0.85
PTPRN-204ENST00000423636 TMEM37Q8WXS4 190 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 FRZBQ92765 325 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 ASCL2Q99929 193 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 GPR61Q9BZJ8 451 aa9.71□□□□□ -0.85
PTPRN-204ENST00000423636 RPUSD1Q9UJJ7 312 aaKnown RBP9.71□□□□□ -0.85
PTPRN-204ENST00000423636 hADV38S2A0JD32 116 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 NDUFB3O43676 98 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 FRMD6-AS1P0C7T7 363 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 OR5I1Q13606 314 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 SLC35E3Q7Z769 313 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 STPG3Q8N7X2 389 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 ZNF439Q8NDP4 499 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 DDB2Q92466 427 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 GGTLC1Q9BX51 225 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 COA4Q9NYJ1 87 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 RPH3ALQ9UNE2 315 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 HILPDAQ9Y5L2 63 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 CTXND1A0A1B0GTU2 59 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 CLN5O75503 358 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 PLEKHA3Q9HB20 300 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
PTPRN-204ENST00000423636 MRPL36Q9P0J6 103 aaKnown RBP9.71□□□□□ -0.86
PTPRN-204ENST00000423636 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 NKX6-3A6NJ46 265 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 SLC17A3O00476 420 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 OR7C2O60412 319 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 IL6RP08887 468 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 OR10J1P30954 320 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 RPL23P62829 140 aaKnown RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 FAM210BQ96KR6 192 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 LINC00479Q96M42 142 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 FAM103A1Q9BTL3 118 aaKnown RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 C15orf61A6NNL5 157 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 LEMD1Q68G75 181 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 MBD3L1Q8WWY6 194 aa9.7□□□□□ -0.86
PTPRN-204ENST00000423636 CIB3Q96Q77 187 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 PSMG3Q9BT73 122 aaPredicted RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 YTHDF2Q9Y5A9 579 aaKnown RBP9.7□□□□□ -0.86
PTPRN-204ENST00000423636 IGHV1-69-2A0A0G2JMI3 117 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 FAM90A26D6RGX4 464 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 MOSP00540 346 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HSPE1P61604 102 aaKnown RBP9.69□□□□□ -0.86
PTPRN-204ENST00000423636 ARF6P62330 175 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 ZNF90Q03938 601 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 KLRD1Q13241 179 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 TMEM241Q24JQ0 296 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 IGF2-ASQ6U949 168 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 C1QL4Q86Z23 238 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 LPAR2Q9HBW0 351 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 ONECUT1Q9UBC0 465 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 BTBD17A6NE02 478 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 TRGC1P0CF51 173 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 AGAP20933 346 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 BSXQ3C1V8 233 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 SP5Q6BEB4 398 aaPredicted RBP9.69□□□□□ -0.86
PTPRN-204ENST00000423636 COMMD5Q9GZQ3 224 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 EGLN1Q9GZT9 426 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 WDR83OSQ9Y284 106 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 C5orf52A6NGY3 159 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BKO60814 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BJP06899 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BOP23527 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BBP33778 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 CDKN1AP38936 164 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 MEOX2P50222 304 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BDP58876 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST1H2BCP62807 126 aa9.69□□□□□ -0.86
PTPRN-204ENST00000423636 HIST2H2BEQ16778 126 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms