RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 PROP1O75360 226 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 CA2P00918 260 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 CECR9P0C854 216 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 LINC00869P0C866 280 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
LIMS1-207ENST00000422797 PRCDQ00LT1 54 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 PMCHL1Q16048 86 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 C3orf36Q3SXR2 165 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 KRTCAP3Q53RY4 240 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 C2orf83Q53S99 150 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 OR4A47Q6IF82 309 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 TMEM136Q6ZRR5 245 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 FAM231DQ6ZW35 169 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 C1orf210Q8IVY1 113 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 ABHD12Q8N2K0 398 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 OR1L8Q8NGR8 309 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 CACNG8Q8WXS5 425 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 TMEM190Q8WZ59 177 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 NABP2Q9BQ15 211 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 TMEM208Q9BTX3 173 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 SEPSECSQ9HD40 501 aaKnown RBP9.07□□□□□ -0.96
LIMS1-207ENST00000422797 OR51B2Q9Y5P1 312 aa9.07□□□□□ -0.96
LIMS1-207ENST00000422797 IGKV1D-17A0A075B6S4 117 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 IGHV2OR16-5A0A0B4J2B6 119 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 SMIM27A0A1W2PRY6 76 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 IZUMO1RA6ND01 250 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 PRR33A8MZF0 331 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 INS-IGF2F8WCM5 200 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 SLC17A3O00476 420 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 CGB3P0DN86 165 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 CGB7P0DN87 165 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 BMP5P22003 454 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 PPOXP50336 477 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 PSG5Q15238 335 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 OR8I2Q8N0Y5 310 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 VN1R17PQ8TDU5 208 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 SMIM12Q96EX1 92 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 C1orf159Q96HA4 380 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 WFIKKN1Q96NZ8 548 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 ATG101Q9BSB4 218 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 FAM234AQ9H0X4 552 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 GNB4Q9HAV0 340 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 IDI2-AS1Q9NZ38 188 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 DUSP13Q9UII6 198 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 CBY1Q9Y3M2 126 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 ESPL1Q14674 2120 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 MED12LQ86YW9 2145 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 FREM1Q5H8C1 2179 aa9.06□□□□□ -0.96
LIMS1-207ENST00000422797 KBTBD11-OT1A0A1B0GTJ5 212 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 A0A1B0GUS0 222 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 TM4SF5O14894 197 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ZNF324O75467 553 aaPredicted RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 CGAP01215 116 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 HNF1AP20823 631 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 G0S2P27469 103 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 AMTP48728 403 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 RPL39P5Q59GN2 51 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 FAM53AQ6NSI3 398 aaPredicted RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 VASH2Q86V25 355 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 TPRX1Q8N7U7 411 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 TMEM105Q8N8V8 129 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 SARAFQ96BY9 339 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ZNF714Q96N38 554 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 TRIB1Q96RU8 372 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 LINC00574Q9H8X3 128 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ZNF331Q9NQX6 463 aaPredicted RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 PLSCR4Q9NRQ2 329 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 DCAF16Q9NXF7 216 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 CDC42EP3Q9UKI2 254 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 PAM16Q9Y3D7 125 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 TBL2Q9Y4P3 447 aaKnown RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 R4GN57 208 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 DOCK10Q96BY6 2186 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ZNF407Q9C0G0 2248 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 IGHV3-64DA0A0J9YX35 117 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 J3QR06 171 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 UPK2O00526 184 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 IRF2P14316 349 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 IGFBP2P18065 325 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 CTRLP40313 264 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 COMPP49747 757 aaPredicted RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 FABP6P51161 128 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 MRPS11P82912 194 aaKnown RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 LTC4SQ16873 150 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 IBA57Q5T440 356 aaKnown RBP9.05□□□□□ -0.96
LIMS1-207ENST00000422797 SPATA31B1PQ5VZV4 182 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 MIR17HGQ75NE6 70 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ATP5L2Q7Z4Y8 100 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 ST6GALNAC3Q8NDV1 305 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 OR2Z1Q8NG97 314 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 OR1L4Q8NGR5 311 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 FAM222BQ8WU58 562 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 BORCS7Q96B45 105 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 LOXL4Q96JB6 756 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 IGF2BP2-AS1Q96M15 143 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 OR2V2Q96R30 315 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 LPAR2Q9HBW0 351 aa9.05□□□□□ -0.96
LIMS1-207ENST00000422797 MSL2Q9HCI7 577 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms