RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 DMRTC2Q8IXT2 367 aaPredicted RBP12.97□□□□□ -0.33
CDH1-202ENST00000422392 MKRN2OSH3BPM6 223 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 CGB3P0DN86 165 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 CGB7P0DN87 165 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 CBLN1P23435 193 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 OR5I1Q13606 314 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 ZNF474Q6S9Z5 364 aaPredicted RBP12.96□□□□□ -0.33
CDH1-202ENST00000422392 IGFL2Q6UWQ7 119 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 MIR17HGQ75NE6 70 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 IDI2-AS1Q9NZ38 188 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 GVINP1Q7Z2Y8 2422 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.33
CDH1-202ENST00000422392 TRGV8A0A0C4DH27 118 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 LHBP01229 141 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 HSPE1P61604 102 aaKnown RBP12.96□□□□□ -0.34
CDH1-202ENST00000422392 C22orf34Q6ZV56 151 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 FAM216AQ8WUB2 273 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 TMEM14BQ9NUH8 114 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 DCAF16Q9NXF7 216 aa12.96□□□□□ -0.34
CDH1-202ENST00000422392 SCGB1D1O95968 90 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 IGKV1-16P04430 117 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
CDH1-202ENST00000422392 MLANAQ16655 118 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 LRFN3Q9BTN0 628 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 ASCL3Q9NQ33 180 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 KBTBD11-OT1A0A1B0GTJ5 212 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 RHOBP62745 196 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 USF2Q15853 346 aaPredicted RBP12.95□□□□□ -0.34
CDH1-202ENST00000422392 FAM216BQ8N7L0 139 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 CCL13Q99616 98 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 ENY2Q9NPA8 101 aa12.95□□□□□ -0.34
CDH1-202ENST00000422392 PIEZO2Q9H5I5 2752 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 IGKV1OR2-108A0A075B7D4 117 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 CFHR2P36980 270 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 ZNF90Q03938 601 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 ZCCHC14Q8WYQ9 949 aaKnown RBP12.94□□□□□ -0.34
CDH1-202ENST00000422392 OR51B2Q9Y5P1 312 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 SRRM4A7MD48 611 aaKnown RBP12.94□□□□□ -0.34
CDH1-202ENST00000422392 FTH1P19P0C7X4 201 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 KIR2DS2P43631 304 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 RAB7AP51149 207 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 RND1Q92730 232 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 GCM1Q9NP62 436 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 FOXA2Q9Y261 457 aaPredicted RBP12.94□□□□□ -0.34
CDH1-202ENST00000422392 ZGRF1Q86YA3 2104 aa12.94□□□□□ -0.34
CDH1-202ENST00000422392 CUL9Q8IWT3 2517 aa12.93□□□□□ -0.34
CDH1-202ENST00000422392 PSG5Q15238 335 aa12.93□□□□□ -0.34
CDH1-202ENST00000422392 FKBP11Q9NYL4 201 aa12.93□□□□□ -0.34
CDH1-202ENST00000422392 TP53TG3Q9ULZ0 132 aa12.93□□□□□ -0.34
CDH1-202ENST00000422392 TP53TG5Q9Y2B4 290 aa12.93□□□□□ -0.34
CDH1-202ENST00000422392 TRGV10A0A0A0MS01 117 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 J3QR06 171 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 ZZEF1O43149 2961 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 SPINK4O60575 86 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 LINC00869P0C866 280 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 GLRXP35754 106 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 PRR20EP86478 221 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 PRR20CP86479 221 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 PRR20DP86480 221 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 PRR20BP86481 221 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 PRR20AP86496 221 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 TXNDC17Q9BRA2 123 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 NDUFAF3Q9BU61 184 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 ANKRD11Q6UB99 2663 aaPredicted RBP12.92□□□□□ -0.34
CDH1-202ENST00000422392 RPL29P47914 159 aaKnown RBP12.92□□□□□ -0.34
CDH1-202ENST00000422392 IQCJQ1A5X6 159 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 ZNF439Q8NDP4 499 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 NEUROG1Q92886 237 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 EAF1Q96JC9 268 aaPredicted RBP12.92□□□□□ -0.34
CDH1-202ENST00000422392 NOL4LQ96MY1 436 aaPredicted RBP12.92□□□□□ -0.34
CDH1-202ENST00000422392 FAM215AQ9Y5M1 114 aa12.92□□□□□ -0.34
CDH1-202ENST00000422392 MBD3L4A6NDZ8 208 aaPredicted RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 MBD3L3A6NE82 208 aaPredicted RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 MBD3L5A6NJ08 208 aaPredicted RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 F2Z2F3 143 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 OR10J4P0C629 311 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 CRYBB3P26998 211 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 CCKARP32238 428 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 ASPHD1Q5U4P2 390 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 OR10W1Q8NGF6 305 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 MBD3L2Q8NHZ7 208 aaPredicted RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 MS4A10Q96PG2 267 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 GAFA1Q96PS6 74 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 NABP2Q9BQ15 211 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 EREGO14944 169 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 IER3P46695 156 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 LINC00310P59036 64 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 ERVFC1-1P60608 527 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 RAB31Q13636 194 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 TIMM23BQ5SRD1 257 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 DOLPP1Q86YN1 238 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 ZCCHC24Q8N2G6 241 aaKnown RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 PLEKHA3Q9HB20 300 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 RNF7Q9UBF6 113 aa12.91□□□□□ -0.34
CDH1-202ENST00000422392 POLR3KQ9Y2Y1 108 aaPredicted RBP12.91□□□□□ -0.34
CDH1-202ENST00000422392 IGHV1-46P01743 117 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
CDH1-202ENST00000422392 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms