RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 MRPL30Q8TCC3 161 aaKnown RBP10.6□□□□□ -0.71
LINC00642-201ENST00000419459 TMEM37Q8WXS4 190 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 GPR146Q96CH1 333 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 C20orf144Q9BQM9 153 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 PARLQ9H300 379 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 CCL28Q9NRJ3 127 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 PSENENQ9NZ42 101 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 IGKV1D-13A0A0B4J2D9 117 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 CTXND1A0A1B0GTU2 59 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 FAM90A26D6RGX4 464 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 OR2H2O95918 312 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 SCGB1D1O95968 90 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 IGKV1-13P0DP09 117 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 GABRA2P47869 451 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 OR3A1P47881 315 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 ZNRF1Q8ND25 227 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 TAF15Q92804 592 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00642-201ENST00000419459 TMEM208Q9BTX3 173 aa10.6□□□□□ -0.71
LINC00642-201ENST00000419459 POLR3KQ9Y2Y1 108 aaPredicted RBP10.6□□□□□ -0.71
LINC00642-201ENST00000419459 TRBV6-6A0A0A6YYG2 114 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 OOEPA6NGQ2 149 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 H3BP45 60 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 PSPNO60542 156 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 HAND1O96004 215 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 EFNA4P52798 201 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 ATP5J2P56134 94 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 ZNF146Q15072 292 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 FGFRL1Q8N441 504 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 CD177Q8N6Q3 437 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 NECAP1Q8NC96 275 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 NEU4Q8WWR8 484 aaPredicted RBP10.59□□□□□ -0.71
LINC00642-201ENST00000419459 CHODLQ9H9P2 273 aa10.59□□□□□ -0.71
LINC00642-201ENST00000419459 TRAV24A0A0B4J272 114 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 TMPRSS2O15393 492 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 SCTP09683 121 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 ATP6V1FQ16864 119 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 LINC00596Q86U02 117 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 FAM216BQ8N7L0 139 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 RPUSD4Q96CM3 377 aaKnown RBP10.58□□□□□ -0.72
LINC00642-201ENST00000419459 OR2W1Q9Y3N9 320 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 WIPI2Q9Y4P8 454 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 PPIAL4EA0A075B759 164 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 A0A0G2JRQ6 117 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 PPIAL4DF5H284 164 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 PPIAL4FP0DN26 164 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 ELLP55199 621 aaPredicted RBP10.58□□□□□ -0.72
LINC00642-201ENST00000419459 GNB2P62879 340 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 FOXL1Q12952 345 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 Q6P435 159 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 RPP25LQ8N5L8 163 aaKnown RBP10.58□□□□□ -0.72
LINC00642-201ENST00000419459 MS4A10Q96PG2 267 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 CCL13Q99616 98 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 PPIAL4AQ9Y536 164 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 ITPR3Q14573 2671 aa10.58□□□□□ -0.72
LINC00642-201ENST00000419459 MALRD1Q5VYJ5 2156 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 WNK2Q9Y3S1 2297 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 SLC33A1O00400 549 aaPredicted RBP10.57□□□□□ -0.72
LINC00642-201ENST00000419459 DEGS1O15121 323 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 NXPH3O95157 252 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 PRDX2P32119 198 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 RPL15P61313 204 aaKnown RBP10.57□□□□□ -0.72
LINC00642-201ENST00000419459 PAFAH1B2P68402 229 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 STUMQ69YW2 141 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 LYPD2Q6UXB3 125 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 TMEM144Q7Z5S9 345 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 HAPLN4Q86UW8 402 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 NEK7Q8TDX7 302 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 NEIL1Q96FI4 390 aaPredicted RBP10.57□□□□□ -0.72
LINC00642-201ENST00000419459 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 ELOVL1Q9BW60 279 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 PXMP4Q9Y6I8 212 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 ABCA2Q9BZC7 2435 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 NPIPB11E5RHQ5 1161 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 HPRT1P00492 218 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 ARL16Q0P5N6 197 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 OR4C12Q96R67 309 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 BPESC1Q9GZL8 116 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 CACNG5Q9UF02 275 aa10.57□□□□□ -0.72
LINC00642-201ENST00000419459 YLPM1P49750 1951 aaKnown RBP10.56□□□□□ -0.72
LINC00642-201ENST00000419459 PRRC2AP48634 2157 aaKnown RBP10.56□□□□□ -0.72
LINC00642-201ENST00000419459 SH2D1BO14796 132 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 FCN3O75636 299 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 ESDP10768 282 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 IL3RAP26951 378 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 SLC38A11Q08AI6 406 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 TEX36Q5VZQ5 186 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 TRAPPC1Q9Y5R8 145 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 MYO9AB2RTY4 2548 aa10.56□□□□□ -0.72
LINC00642-201ENST00000419459 TEX15Q9BXT5 2789 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 TRAV38-1A0A0B4J264 116 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 IGKV1-6A0A0C4DH72 117 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 PDE6DO43924 150 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 RPL29P47914 159 aaKnown RBP10.55□□□□□ -0.72
LINC00642-201ENST00000419459 EDDM3AQ14507 147 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 TMEM183BQ1AE95 376 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 TMEM249Q2WGJ8 235 aa10.55□□□□□ -0.72
LINC00642-201ENST00000419459 TMEM14EPQ6UXP3 125 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms