RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZNF71Q9NQZ8 489 aaPredicted RBP8.06□□□□□ -1.12
CD44-206ENST00000415148 DUSP13Q9UII6 198 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 FZR1Q9UM11 496 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 AHRRA9YTQ3 701 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 LHBP01229 141 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 SP9P0CG40 484 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 NPY1RP25929 384 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 TFPI2P48307 235 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 RPL19P84098 196 aaKnown RBP8.06□□□□□ -1.12
CD44-206ENST00000415148 PRR20EP86478 221 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 PRR20CP86479 221 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 PRR20DP86480 221 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 PRR20BP86481 221 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 PRR20AP86496 221 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 OR5I1Q13606 314 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 RPL39P5Q59GN2 51 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 ARSJQ5FYB0 599 aaPredicted RBP8.06□□□□□ -1.12
CD44-206ENST00000415148 ATP1A1-AS1Q5TC04 95 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 DHRS13Q6UX07 377 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 MRPL52Q86TS9 123 aaKnown RBP8.06□□□□□ -1.12
CD44-206ENST00000415148 C9orf106Q8NAJ2 232 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 SLC24A4Q8NFF2 622 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 NEUROG1Q92886 237 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 HSPB9Q9BQS6 159 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 ENY2Q9NPA8 101 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 PARD6AQ9NPB6 346 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 TMEM106BQ9NUM4 274 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 CALYQ9NYX4 217 aa8.06□□□□□ -1.12
CD44-206ENST00000415148 SPINK4O60575 86 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 TPPP2P59282 170 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 RANP62826 216 aaKnown RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 RPL31P62899 125 aaKnown RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 ZNF90Q03938 601 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 BATFQ16520 125 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 STPG3Q8N7X2 389 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 VN1R17PQ8TDU5 208 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 C19orf24Q9BVV8 132 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 TMEM167BQ9NRX6 74 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 OR10J4P0C629 311 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 LGALS4P56470 323 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 Q0VG73 95 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 TMEM30BQ3MIR4 351 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 C3orf36Q3SXR2 165 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 COX19Q49B96 90 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 C1orf229Q6ZS94 237 aaPredicted RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 BHLHA15Q7RTS1 189 aaPredicted RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 PNKDQ8N490 385 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 EAF1Q96JC9 268 aaPredicted RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 MRPL18Q9H0U6 180 aaKnown RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 SEPSECSQ9HD40 501 aaKnown RBP8.05□□□□□ -1.12
CD44-206ENST00000415148 ZNF257Q9Y2Q1 563 aa8.05□□□□□ -1.12
CD44-206ENST00000415148 CGAP01215 116 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 MYOD1P15172 320 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 C17orf58Q2M2W7 97 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 RPEL1Q2QD12 228 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 OR4A47Q6IF82 309 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 TEX43Q6ZNM6 134 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 Q8N976 141 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 FAM222BQ8WU58 562 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 FAM122AQ96E09 287 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 SLC35E1Q96K37 410 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 FAM103A1Q9BTL3 118 aaKnown RBP8.04□□□□□ -1.12
CD44-206ENST00000415148 GNB1LQ9BYB4 327 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 FBXL7Q9UJT9 491 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 PRNDQ9UKY0 176 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 SLC45A2Q9UMX9 530 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 PROCRQ9UNN8 238 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 SLC25A15Q9Y619 301 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 BOD1L1Q8NFC6 3051 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 KBTBD11-OT1A0A1B0GTJ5 212 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 DLEU1O43261 78 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 CA2P00918 260 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 LINC00869P0C866 280 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 BRS3P32247 399 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 IER3P46695 156 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 SLC35B1P78383 322 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 RTL8BQ17RB0 113 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 KIAA1644Q3SXP7 199 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 CT45A1Q5HYN5 189 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 OR4P4Q8NGL7 312 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 CT45A3Q8NHU0 189 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 DKK4Q9UBT3 224 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 IL19Q9UHD0 177 aa8.04□□□□□ -1.12
CD44-206ENST00000415148 TRAV17A0A0B4J275 112 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 M0QZK8 103 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 TNFSF13O75888 250 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 CRISP2P16562 243 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 C21orf62-AS1Q17RA5 79 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 ZNRF1Q8ND25 227 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 ST6GALNAC3Q8NDV1 305 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 OR1L6Q8NGR2 347 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 STARD4Q96DR4 205 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 LINC00574Q9H8X3 128 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 LPAR2Q9HBW0 351 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 IDI2-AS1Q9NZ38 188 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 NCOR1O75376 2440 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 TNCP24821 2201 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 SAA2-SAA4A0A096LPE2 208 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 HELTA6NFD8 242 aa8.03□□□□□ -1.12
CD44-206ENST00000415148 MT-ND6P03923 174 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms