RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 HARBI1Q96MB7 349 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 GP6Q9HCN6 339 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 A0A1W2PP11 408 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 IGLC7A0M8Q6 106 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 C9orf118A6NHY6 69 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 KLF7O75840 302 aaPredicted RBP7.23□□□□□ -1.25
PBRM1-209ENST00000412587 MORN2Q502X0 79 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 LYPD6BQ8NI32 183 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 KCNK17Q96T54 332 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 LINC00470Q9BZP3 86 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 FBXL7Q9UJT9 491 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 SELENOKQ9Y6D0 94 aa7.23□□□□□ -1.25
PBRM1-209ENST00000412587 SPTAN1Q13813 2472 aaKnown RBP7.22□□□□□ -1.25
PBRM1-209ENST00000412587 FAM181BA6NEQ2 426 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 A8MWL6 223 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 PDLIM4P50479 330 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 GFRA1P56159 465 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF562Q6V9R5 426 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 FDCSPQ8NFU4 85 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 NAA38Q9BRA0 125 aaKnown RBP7.22□□□□□ -1.25
PBRM1-209ENST00000412587 GPR27Q9NS67 375 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 A0A087X0K7 114 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 PSMB11A5LHX3 300 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM14DPA8MWL7 114 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 MPDU1O75352 247 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 SAP30O75446 220 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 EGR1P18146 543 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 GZMHP20718 246 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 KIR3DS1Q14943 382 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 LRRC75BQ2VPJ9 315 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 SLC25A47Q6Q0C1 308 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 Q6ZVH6 145 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 TTC9CQ8N5M4 171 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 OR1K1Q8NGR3 316 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 SPXQ9BT56 116 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 IL36GQ9NZH8 169 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 IGKV3D-11A0A0A0MRZ8 115 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 B5MCH6 92 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 MS4A18H0YCH9 400 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 LILRA1O75019 489 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 FXYD3Q14802 87 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 MS4A18Q3C1V0 323 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 WDR82Q6UXN9 313 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 SPSB4Q96A44 273 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF479Q96JC4 524 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 PATJQ8NI35 1801 aa7.22□□□□□ -1.25
PBRM1-209ENST00000412587 PRR19A6NJB7 356 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 H0Y980 276 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 THY1P04216 161 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 C1QTNF9P0C862 333 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 PSG3Q16557 428 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 PQLC2Q6ZP29 291 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF519Q8TB69 540 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 ZNF418Q8TF45 676 aaPredicted RBP7.21□□□□□ -1.25
PBRM1-209ENST00000412587 TMEM171Q8WVE6 324 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 CCL28Q9NRJ3 127 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 AMMECR1Q9Y4X0 333 aaPredicted RBP7.21□□□□□ -1.25
PBRM1-209ENST00000412587 IGLV1-36A0A0B4J1U3 117 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 G3V4G9 280 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 COX7A2P2O60397 106 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 HERV-K104P63124 156 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 LCN12Q6JVE5 192 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 UFC1Q9Y3C8 167 aa7.21□□□□□ -1.25
PBRM1-209ENST00000412587 ARHGEF17Q96PE2 2063 aaPredicted RBP7.21□□□□□ -1.26
PBRM1-209ENST00000412587 IGKV1D-42A0A075B6H8 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 CD55P08174 381 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 ZNF137PP52743 207 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 SPSB3Q6PJ21 355 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 A0A1W2PRD5 423 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 A0A1W2PRF3 423 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 A0A1W2PRM7 423 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE12JA6NER3 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 OOEPA6NGQ2 149 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 C9orf172C9J069 976 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE7O76087 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 SLC25A5P05141 298 aaKnown RBP7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE12FP0CL80 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE12GP0CL81 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE12IP0CL82 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GAGE4Q13068 117 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 TM4SF20Q53R12 229 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 TMEM116Q8NCL8 245 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 GPR146Q96CH1 333 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 MAP1LC3AQ9H492 121 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 TTC28Q96AY4 2481 aa7.21□□□□□ -1.26
PBRM1-209ENST00000412587 TRAV8-2A0A0B4J237 113 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 C17orf51A8MQB3 221 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 OR9G9P0C7N8 305 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 MRGPRFQ96AM1 343 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 AMELYQ99218 206 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 HDHD3Q9BSH5 251 aaPredicted RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 AICDAQ9GZX7 198 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 AP5S1Q9NUS5 200 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 NHP2Q9NX24 153 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 MRPL27Q9P0M9 148 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 RLFQ13129 1914 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 SPTBN1Q01082 2364 aaKnown RBP7.2□□□□□ -1.26
PBRM1-209ENST00000412587 TSPAN13O95857 204 aa7.2□□□□□ -1.26
PBRM1-209ENST00000412587 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms