RNA–Protein interactions for RNA: ENST00000409958.6

VSX1-204, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-204ENST00000409958 C14orf166Q9Y224 244 aaKnown RBP15.98■□□□□ 0.15
VSX1-204ENST00000409958 NSG2Q9Y328 171 aa15.98■□□□□ 0.15
VSX1-204ENST00000409958 PRKDCP78527 4128 aaKnown RBP15.98■□□□□ 0.15
VSX1-204ENST00000409958 TEX50A0A1B0GTY4 177 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 IGLC7A0M8Q6 106 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 ANKRD34BA5PLL1 514 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 B3GALNT1O75752 331 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 OR2J3O76001 311 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 TRAPPC2P0DI81 140 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 TRAPPC2BP0DI82 140 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 SPANXN2Q5MJ10 180 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 H2BFWTQ7Z2G1 175 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 HSD17B13Q7Z5P4 300 aaPredicted RBP15.97■□□□□ 0.15
VSX1-204ENST00000409958 OR6Q1Q8NGQ2 317 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 FANCD2OSQ96PS1 177 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 RTBDNQ9BSG5 229 aaPredicted RBP15.97■□□□□ 0.15
VSX1-204ENST00000409958 NDUFA4L2Q9NRX3 87 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 FKBP11Q9NYL4 201 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 ZMAT5Q9UDW3 170 aaKnown RBP15.97■□□□□ 0.15
VSX1-204ENST00000409958 GPR132Q9UNW8 380 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 OR51B2Q9Y5P1 312 aa15.97■□□□□ 0.15
VSX1-204ENST00000409958 HIST1H1BP16401 226 aaKnown RBP15.96■□□□□ 0.15
VSX1-204ENST00000409958 AP3S2P59780 193 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 EXOSC2Q13868 293 aaKnown RBP15.96■□□□□ 0.15
VSX1-204ENST00000409958 KLF9Q13886 244 aaPredicted RBP15.96■□□□□ 0.15
VSX1-204ENST00000409958 C19orf35Q6ZS72 473 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 OR5B3Q8NH48 314 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 C5orf66Q9H5L9 145 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 TMEM14BQ9NUH8 114 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 MCUBQ9NWR8 336 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 FBXL7Q9UJT9 491 aa15.96■□□□□ 0.15
VSX1-204ENST00000409958 C15orf61A6NNL5 157 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 ATG12O94817 140 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 REG1AP05451 166 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 DEFA4P12838 97 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 UCP1P25874 307 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 FAUP35544 74 aaKnown RBP15.95■□□□□ 0.14
VSX1-204ENST00000409958 INSL3P51460 131 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 C15orf32Q32M92 178 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 FAM209BQ5JX69 171 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 TOMM5Q8N4H5 51 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 GDPD1Q8N9F7 314 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 SCGB3A2Q96PL1 93 aa15.95■□□□□ 0.14
VSX1-204ENST00000409958 TRBV12-3P01733 135 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 SP6Q3SY56 376 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 OR10W1Q8NGF6 305 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 OR4A16Q8NH70 328 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 DEDD2Q8WXF8 326 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 LSM10Q969L4 123 aaKnown RBP15.94■□□□□ 0.14
VSX1-204ENST00000409958 IGLV11-55A0A075B6I3 123 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.94■□□□□ 0.14
VSX1-204ENST00000409958 DBX1A6NMT0 343 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 OR13C7P0DN81 318 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 WT1-ASQ06250 92 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 TRIM16LQ309B1 348 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 ACSM6Q6P461 480 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 ZNF429Q86V71 674 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 HINT2Q9BX68 163 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 SRRQ9GZT4 340 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 NAA60Q9H7X0 242 aa15.94■□□□□ 0.14
VSX1-204ENST00000409958 TEX13DA0A0J9YY54 714 aaPredicted RBP15.93■□□□□ 0.14
VSX1-204ENST00000409958 NDUFB8O95169 186 aa15.93■□□□□ 0.14
VSX1-204ENST00000409958 IGKV1-5P01602 117 aa15.93■□□□□ 0.14
VSX1-204ENST00000409958 P0C879 139 aa15.93■□□□□ 0.14
VSX1-204ENST00000409958 KLF5Q13887 457 aaPredicted RBP15.93■□□□□ 0.14
VSX1-204ENST00000409958 TMEM56Q96MV1 263 aa15.93■□□□□ 0.14
VSX1-204ENST00000409958 TMEM222Q9H0R3 208 aa15.93■□□□□ 0.14
VSX1-204ENST00000409958 CRYM-AS1A6NIL9 109 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 CYB5BO43169 146 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 OR5AC1P0C628 307 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 AKR1C2P52895 323 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 MRAPQ8TCY5 172 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 GLYATL2Q8WU03 294 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 THYN1Q9P016 225 aa15.92■□□□□ 0.14
VSX1-204ENST00000409958 SAP30O75446 220 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 CDS2O95674 445 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 DHODHQ02127 395 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 RPEL1Q2QD12 228 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 EEF1AKMT3Q96AZ1 226 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 ELOVL1Q9BW60 279 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 DMRT1Q9Y5R6 373 aa15.91■□□□□ 0.14
VSX1-204ENST00000409958 WI2-2373I1.2A0A1W2PRP0 233 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 K7EIL1 84 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 BMPR1BO00238 502 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 HSPE1P61604 102 aaKnown RBP15.9■□□□□ 0.14
VSX1-204ENST00000409958 TATDN3Q17R31 274 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 IZUMO4Q1ZYL8 232 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 SGPP2Q8IWX5 399 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 RRNAD1Q96FB5 475 aaKnown RBP15.9■□□□□ 0.14
VSX1-204ENST00000409958 CXorf58Q96LI9 332 aa15.9■□□□□ 0.14
VSX1-204ENST00000409958 F11RQ9Y624 299 aaKnown RBP15.9■□□□□ 0.14
VSX1-204ENST00000409958 MECP2P51608 486 aaKnown RBP15.89■□□□□ 0.13
VSX1-204ENST00000409958 SYNJ2BPP57105 145 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 PRCDQ00LT1 54 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 OR9G4Q8NGQ1 327 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 RBPMSQ93062 196 aaKnown RBP15.89■□□□□ 0.13
VSX1-204ENST00000409958 TMEM230Q96A57 120 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 GALNT14Q96FL9 552 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 CCDC140Q96MF4 163 aa15.89■□□□□ 0.13
VSX1-204ENST00000409958 OR4C12Q96R67 309 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms