RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 BSXQ3C1V8 233 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 CTRB2Q6GPI1 263 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 TGIF2LXQ8IUE1 241 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 WASHC3Q9Y3C0 194 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 FNDC10F2Z333 226 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 USF1P22415 310 aaPredicted RBP16.31■□□□□ 0.2
USP39-204ENST00000409766 ATP5IP56385 69 aaPredicted RBP16.31■□□□□ 0.2
USP39-204ENST00000409766 RPL8P62917 257 aaKnown RBP16.31■□□□□ 0.2
USP39-204ENST00000409766 TMEM249Q2WGJ8 235 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 RNF212Q495C1 297 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 MIC13Q5XKP0 118 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 TEPPQ6URK8 271 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 FAM24BQ8N5W8 94 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 GATAD1Q8WUU5 269 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 YPEL4Q96NS1 127 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 NDUFA4L2Q9NRX3 87 aa16.31■□□□□ 0.2
USP39-204ENST00000409766 OR2C1O95371 312 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 IGLV2-23P01705 113 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 OR4A5Q8NH83 315 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 TMEM167AQ8TBQ9 72 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 TNFRSF14Q92956 283 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 RAB1BQ9H0U4 201 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 CBLN4Q9NTU7 201 aa16.3■□□□□ 0.2
USP39-204ENST00000409766 RAB13P51153 203 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 C2orf83Q53S99 150 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 WDR25Q64LD2 544 aaPredicted RBP16.29■□□□□ 0.2
USP39-204ENST00000409766 OR10W1Q8NGF6 305 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 VSTM2AQ8TAG5 236 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 NEIL1Q96FI4 390 aaPredicted RBP16.29■□□□□ 0.2
USP39-204ENST00000409766 COMMD5Q9GZQ3 224 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 PATZ1Q9HBE1 687 aaKnown RBP16.29■□□□□ 0.2
USP39-204ENST00000409766 IGHV2-26A0A0B4J1V2 119 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 ZNF727A8MUV8 499 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 NDUFS6O75380 124 aaKnown RBP16.29■□□□□ 0.2
USP39-204ENST00000409766 IGLV1-47P01700 117 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 IL3RAP26951 378 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 MC5RP33032 325 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 MAS1LP35410 378 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 PNRC1Q12796 327 aaPredicted RBP16.29■□□□□ 0.2
USP39-204ENST00000409766 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 OR1L8Q8NGR8 309 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 KCNIP2Q9NS61 270 aa16.29■□□□□ 0.2
USP39-204ENST00000409766 HIVEP3Q5T1R4 2406 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 A0A1W2PPV4 95 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 B4DEV8 164 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 RNASE2P10153 161 aaKnown RBP16.28■□□□□ 0.2
USP39-204ENST00000409766 DLX1P56177 255 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 IQCF2Q8IXL9 164 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 C8orf46Q8TAG6 207 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 SSMEM1Q8WWF3 244 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 FAM122AQ96E09 287 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 SDF2L1Q9HCN8 221 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 TMEM8BA6NDV4 472 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 E7EUB6 86 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 INS-IGF2F8WCM5 200 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 TMEM250H0YL14 139 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 LY6HO94772 140 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 RBP4P02753 201 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 RAB5AP20339 215 aa16.28■□□□□ 0.2
USP39-204ENST00000409766 PPIAL4CA0A0B4J2A2 164 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 PAGE4O60829 102 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 SOD3P08294 240 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 PPIAL4GP0DN37 164 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 RPL29P47914 159 aaKnown RBP16.27■□□□□ 0.2
USP39-204ENST00000409766 B2MP61769 119 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 HLA-DRB5Q30154 266 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 MIOXQ9UGB7 285 aa16.27■□□□□ 0.2
USP39-204ENST00000409766 PRRX1P54821 245 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 RAB31Q13636 194 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 STPG3Q8N7X2 389 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 OR8B3Q8NGG8 313 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 RITA1Q96K30 269 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 OR8B2Q96RD0 313 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 SIRT7Q9NRC8 400 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 hCG_1809904A0A1W2PP81 198 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 A0A1W2PR64 198 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 A0A1W2PRV1 198 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 CGB1A6NKQ9 187 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 IGFBP2P18065 325 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 PRR20EP86478 221 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 PRR20CP86479 221 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 PRR20DP86480 221 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 PRR20BP86481 221 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 PRR20AP86496 221 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 HABP2Q14520 560 aaPredicted RBP16.26■□□□□ 0.19
USP39-204ENST00000409766 TMEM144Q7Z5S9 345 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 OR4F5Q8NH21 305 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 OR4F4Q96R69 305 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 CLEC7AQ9BXN2 247 aa16.26■□□□□ 0.19
USP39-204ENST00000409766 ZNF430Q9H8G1 570 aaPredicted RBP16.26■□□□□ 0.19
USP39-204ENST00000409766 TACC2O95359 2948 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 CXorf65A6NEN9 183 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 STAG3L2P0CL84 134 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 STAG3L3P0CL85 134 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 MOB3BQ86TA1 216 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 ZFP82Q8N141 532 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 BEND2Q8NDZ0 799 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 SMIM7Q9BQ49 75 aa16.25■□□□□ 0.19
USP39-204ENST00000409766 LGALS7P47929 136 aa16.24■□□□□ 0.19
USP39-204ENST00000409766 ERHP84090 104 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms