RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 A0A087X0M5 115 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 A0A1B0GX30 115 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 CD99P14209 185 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 EFNB3Q15768 340 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 ATG101Q9BSB4 218 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 ELOVL5Q9NYP7 299 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 XKRY2A2RUG3 117 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 PDE6DO43924 150 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 MPDU1O75352 247 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 IGKV1-16P04430 117 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 HOXC12P31275 282 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 RAB4BP61018 213 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 POU2AF1Q16633 256 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 SDSLQ96GA7 329 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 GNG12Q9UBI6 72 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 HRNRQ86YZ3 2850 aaPredicted RBP8.05□□□□□ -1.12
MSH2-202ENST00000406134 KBTBD11-OT1A0A1B0GTJ5 212 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 DVL1O14640 695 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 TM4SF5O14894 197 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 ETFRF1Q6IPR1 90 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 IGF2-ASQ6U949 168 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 ZNF664Q8N3J9 261 aa8.05□□□□□ -1.12
MSH2-202ENST00000406134 IGHV1-46P01743 117 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 C3orf36Q3SXR2 165 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 REC114Q7Z4M0 266 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 C1orf174Q8IYL3 243 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 OR10G8Q8NGN5 311 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 OR2T10Q8NGZ9 312 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 SSMEM1Q8WWF3 244 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 ANKRD11Q6UB99 2663 aaPredicted RBP8.04□□□□□ -1.12
MSH2-202ENST00000406134 MKRN2OSH3BPM6 223 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 M0R1B8 84 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 SOX15O60248 233 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 CA2P00918 260 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 GLRXP35754 106 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 TIMM23BQ5SRD1 257 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 FAM78BQ5VT40 261 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 CISD2Q8N5K1 135 aaKnown RBP8.04□□□□□ -1.12
MSH2-202ENST00000406134 STPG3Q8N7X2 389 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 OCC1Q8TAD7 63 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 C11orf52Q96A22 123 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 SFRP2Q96HF1 295 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 IMMP2LQ96T52 175 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 PSMB11A5LHX3 300 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 SPRY3O43610 288 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 RBMXL2O75526 392 aaKnown RBP8.04□□□□□ -1.12
MSH2-202ENST00000406134 CT45A6P0DMU7 189 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 CT45A5P0DMU8 189 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 CT45A7P0DMV0 189 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 TIMP3P35625 211 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 FOXL1Q12952 345 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 DEFB109BQ30KR1 87 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 OR4A16Q8NH70 328 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 ACY3Q96HD9 319 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 WFIKKN1Q96NZ8 548 aa8.04□□□□□ -1.12
MSH2-202ENST00000406134 CGB1A6NKQ9 187 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 PPP5D1E7EU14 171 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 E7EUB6 86 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 IFNA10P01566 189 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 IGFBP2P18065 325 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 LCN2P80188 198 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 GBGT1Q8N5D6 347 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 ZNF709Q8N972 641 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 NAV3Q8IVL0 2385 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 SPTAN1Q13813 2472 aaKnown RBP8.03□□□□□ -1.12
MSH2-202ENST00000406134 DDTP30046 118 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 GCHFRP30047 84 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 ZNF788Q6ZQV5 615 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 TMEM256Q8N2U0 113 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 FAM216BQ8N7L0 139 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 S1PR3Q99500 378 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 PIEZO2Q9H5I5 2752 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 TSTD3H0UI37 97 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 PKIAP61925 76 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 MRGPRG-AS1Q2M3A8 158 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 TEX38Q6PEX7 206 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 IGFL3Q6UXB1 125 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 OR5T1Q8NG75 326 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 TMEM37Q8WXS4 190 aa8.03□□□□□ -1.12
MSH2-202ENST00000406134 APC2O95996 2303 aa8.02□□□□□ -1.12
MSH2-202ENST00000406134 A8MWP6 167 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 F6UZH7 168 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 CXorf1O96002 111 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 KLF3P57682 345 aaPredicted RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 SLC25A48Q6ZT89 311 aaKnown RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 SLC24A4Q8NFF2 622 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 OR4S2Q8NH73 311 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 CORO2AQ92828 525 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 HEYLQ9NQ87 328 aaPredicted RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 OR4A8P0C604 315 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 ADMP35318 185 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 KIR2DS2P43631 304 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 RPL29P47914 159 aaKnown RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.13
MSH2-202ENST00000406134 MLANAQ16655 118 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 MORN5Q5VZ52 161 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 TEX36Q5VZQ5 186 aa8.02□□□□□ -1.13
MSH2-202ENST00000406134 CST9LP1Q5W188 147 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms