RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 TPPP2P59282 170 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 ANKRD55Q3KP44 614 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 C8orf86Q6ZUL3 223 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 LYZL2Q7Z4W2 148 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 LGI3Q8N145 548 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SLC35G3Q8N808 338 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 IL22RA2Q969J5 263 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 C20orf85Q9H1P6 137 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 NDUFA4L2Q9NRX3 87 aa13.37□□□□□ -0.27
PTCHD3P3-201ENST00000403073 TRAV6A0A075B6T7 132 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 FAM240BA0A1B0GVZ2 78 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 IGLC7A0M8Q6 106 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 PSMB6P28072 239 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 DEFA5Q01523 94 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 PRR31Q5SQ13 230 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 UBE2E2Q96LR5 201 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SLA2Q9H6Q3 261 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 GNB4Q9HAV0 340 aa13.36□□□□□ -0.27
PTCHD3P3-201ENST00000403073 C9orf170A2RU37 121 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 H3BUA1 57 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 CRYGCP07315 174 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR4E1P0C645 316 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 UBE2MP61081 183 aaKnown RBP13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 HSPE1P61604 102 aaKnown RBP13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SRPXP78539 464 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 FAM219AQ8IW50 185 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR4F17Q8NGA8 305 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR5B3Q8NH48 314 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 LSM10Q969L4 123 aaKnown RBP13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 DUX3Q96PT4 197 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR4F4Q96R69 305 aa13.35□□□□□ -0.27
PTCHD3P3-201ENST00000403073 A0A0B4J2A0 478 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 ST8SIA3O43173 380 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 BRI3O95415 125 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 IGHV3-11P01762 117 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 HLA-AP01891 365 aaKnown RBP13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 OR13C7P0DN81 318 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 CTRB1P17538 263 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 WT1-ASQ06250 92 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 C4orf46Q504U0 113 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 CTRB2Q6GPI1 263 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 ZNF429Q86V71 674 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SRSF8Q9BRL6 282 aaKnown RBP13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 NUDT15Q9NV35 164 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 SHPKQ9UHJ6 478 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 ZNF257Q9Y2Q1 563 aa13.34□□□□□ -0.27
PTCHD3P3-201ENST00000403073 PLXNB1O43157 2135 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 IFNA17P01571 189 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 H2AFB2P0C5Z0 115 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 MECP2P51608 486 aaKnown RBP13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 RAB25P57735 213 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DHRS2Q13268 280 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 TREML4Q6UXN2 200 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 LYG2Q86SG7 212 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 LRTM2Q8N967 370 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 C4orf3Q8WVX3 66 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ALX4Q9H161 411 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 CACNG5Q9UF02 275 aa13.33□□□□□ -0.28
PTCHD3P3-201ENST00000403073 C13orf42A0A1B0GVH6 325 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 I3L521 148 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR2J3O76001 311 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DEFA4P12838 97 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 RHOGP84095 191 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 PRCDQ00LT1 54 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 NMSQ5H8A3 153 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 THOC7Q6I9Y2 204 aaKnown RBP13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ETV3LQ6ZN32 361 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 NRARPQ7Z6K4 114 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 OR52B4Q8NGK2 314 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ENKURQ8TC29 256 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 RAX2Q96IS3 184 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 FANCD2OSQ96PS1 177 aa13.32□□□□□ -0.28
PTCHD3P3-201ENST00000403073 TET2Q6N021 2002 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 TRBV9A0A0B4J1U6 114 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 A0A0G2JLM5 398 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 CCL24O00175 119 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 HOXB5P09067 269 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DEFA1P59665 94 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DEFA3P59666 94 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 HSD17B13Q7Z5P4 300 aaPredicted RBP13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 PDCD10Q9BUL8 212 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 FBXL7Q9UJT9 491 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DMRT1Q9Y5R6 373 aa13.31□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DUXBA0A1W2PPF3 345 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 NXPH3O95157 252 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 NDUFB8O95169 186 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DUS4LO95620 317 aaKnown RBP13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 DHFRP00374 187 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 PF4P02776 101 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 LGALS1P09382 135 aaKnown RBP13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SULT1A3P0DMM9 295 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 SULT1A4P0DMN0 295 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 MYCNOSP40205 109 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 RUNX1Q01196 453 aa13.3□□□□□ -0.28
PTCHD3P3-201ENST00000403073 ATP5G2Q06055 141 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms