RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 SPTAN1Q13813 2472 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 E9PLN8 166 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 FOXS1O43638 330 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 FGF12P61328 243 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 VKORC1Q9BQB6 163 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 ST6GALNAC2Q9UJ37 374 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 A0A087WX48 190 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 WNT2P09544 360 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 LCNL1Q6ZST4 164 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 NR2C2APQ86WQ0 139 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 CA11O75493 328 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 MPC2O95563 127 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 RPRMQ9NS64 109 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 LINC00614P0C842 121 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 RBBP6Q7Z6E9 1792 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 A0A1B0GV90 55 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNF729A6NN14 1252 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 F8WEM9 126 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 ASIPP42127 132 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 Q0VFX4 171 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 MRPL52Q86TS9 123 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 NPVFQ9HCQ7 196 aa9.33□□□□□ -0.92
CACNA1C-216ENST00000399638 RBFOX3A6NFN3 312 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 CELA3AP09093 270 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 Q6ZT83 130 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 C10orf111Q8N326 155 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 FOXA2Q9Y261 457 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 TIMM23O14925 209 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 CD160O95971 181 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 LEPP41159 167 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 SURF2Q15527 256 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 TNFSF18Q9UNG2 199 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 PEX7O00628 323 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 HBDP02042 147 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 FAM3BP58499 235 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 LINC00158P58513 81 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 AWAT1Q58HT5 328 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 C1QL2Q7Z5L3 287 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 C9orf170A2RU37 121 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 SIGLEC5O15389 551 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 IL6RP08887 468 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 CD24P25063 80 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 CMC4P56277 68 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 SLC25A2Q9BXI2 301 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CACNA1C-216ENST00000399638 B4DSR2 109 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 SRSF6Q13247 344 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 OR5AC2Q9NZP5 309 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 MRM2Q9UI43 246 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 Q5BKY6 102 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 CBLN2Q8IUK8 224 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNRF1Q8ND25 227 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 RIF1Q5UIP0 2472 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 ANAPC16Q96DE5 110 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 ABCA1O95477 2261 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 PRTN3P24158 256 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 PMCHL1Q16048 86 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 VKORC1L1Q8N0U8 176 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 MOSP00540 346 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 IFI6P09912 130 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 SRSF12Q8WXF0 261 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 TMEM45BQ96B21 275 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 FAM206AQ9NX38 181 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 DTX4Q9Y2E6 619 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 PXMP4Q9Y6I8 212 aa9.31□□□□□ -0.92
CACNA1C-216ENST00000399638 TIAF1O95411 115 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 OR10S1Q8NGN2 331 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 CACNA1EQ15878 2313 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 TRGC2P03986 189 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 CXCL2P19875 107 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 ZP1P60852 638 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 MBPP02686 304 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-216ENST00000399638 VWC2LB2RUY7 222 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms