RNA–Protein interactions for RNA: ENST00000399606.5

CACNA1C-210, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-210ENST00000399606 SIRT4Q9Y6E7 314 aaPredicted RBP9.34□□□□□ -0.92
CACNA1C-210ENST00000399606 E9PLN8 166 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 FOXS1O43638 330 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 FGF12P61328 243 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 FAM201AQ5SY85 155 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 VKORC1Q9BQB6 163 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 DERL1Q9BUN8 251 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 ST6GALNAC2Q9UJ37 374 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 A0A087WX48 190 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 TRAV2A0A0B4J234 112 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 WNT2P09544 360 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 LCNL1Q6ZST4 164 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 NR2C2APQ86WQ0 139 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 CA11O75493 328 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 TXNDC17Q9BRA2 123 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 RPRMQ9NS64 109 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 MYO7AQ13402 2215 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 SEC11BP0C7V7 166 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 LINC00614P0C842 121 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 BCL2P10415 239 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 ATP6V0CP27449 155 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 KIAA1644Q3SXP7 199 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 SDF2L1Q9HCN8 221 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 RBBP6Q7Z6E9 1792 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 IGHV3-73A0A0B4J1V6 119 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 A0A1B0GV90 55 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 ZNF729A6NN14 1252 aaPredicted RBP9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 F8WEM9 126 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 NDUFB4O95168 129 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 ASIPP42127 132 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 Q0VFX4 171 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 MRPL52Q86TS9 123 aaKnown RBP9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
CACNA1C-210ENST00000399606 CELA3AP09093 270 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 PRADC1Q9BSG0 188 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 MRM2Q9UI43 246 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 LINC00527Q9UJ94 153 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 HLA-DQA1P01909 254 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 MAJINQ3KP22 176 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 Q6ZT83 130 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 C10orf111Q8N326 155 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 FOXA2Q9Y261 457 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 TIMM23O14925 209 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 RCC1P18754 421 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 PEBP1P30086 187 aaKnown RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 LEPP41159 167 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 GAGE2EQ4V326 116 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 GAGE2DQ9UEU5 116 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 KCNE5Q9UJ90 142 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 TNFSF18Q9UNG2 199 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 PEX7O00628 323 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 HBDP02042 147 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 LINC00158P58513 81 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 C1QL2Q7Z5L3 287 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 SIGLEC5O15389 551 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 IL6RP08887 468 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 CD24P25063 80 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 CMC4P56277 68 aaPredicted RBP9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 C17orf47Q8NEP4 570 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 BAALCQ8WXS3 180 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 RARRES2Q99969 163 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 SLC25A2Q9BXI2 301 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 SPCS1Q9Y6A9 102 aa9.32□□□□□ -0.92
CACNA1C-210ENST00000399606 B4DSR2 109 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 SRSF6Q13247 344 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 PAPPA-AS1Q5QFB9 102 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 NRIP2Q9BQI9 281 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 OR5AC2Q9NZP5 309 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 TRBV20OR9-2A0A075B6H5 130 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 Q5BKY6 102 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 TCF24Q7RTU0 167 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 ZNRF1Q8ND25 227 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 VCX2Q9H322 139 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 NPDC1Q9NQX5 325 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 PRRC2BQ5JSZ5 2229 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 CYB561D1Q8N8Q1 229 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 PRTN3P24158 256 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 VKORC1L1Q8N0U8 176 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 SRSF12Q8WXF0 261 aaKnown RBP9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 MOSP00540 346 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 F12P00748 615 aaPredicted RBP9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 IFI6P09912 130 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 TMEM219Q86XT9 240 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 DTX4Q9Y2E6 619 aa9.31□□□□□ -0.92
CACNA1C-210ENST00000399606 TIAF1O95411 115 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 TRGC2P03986 189 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 H3BRM9 83 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 CXCL2P19875 107 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 ZP1P60852 638 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 ORAOV1Q8WV07 137 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 PEF1Q9UBV8 284 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 ZNF660Q6AZW8 331 aaPredicted RBP9.3□□□□□ -0.92
CACNA1C-210ENST00000399606 VWC2LB2RUY7 222 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms