RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 C20orf141Q9NUB4 165 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR11H12B2RN74 326 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM262E9PQX1 116 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TTRP02766 147 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 NPBWR2P48146 333 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SUCLG1P53597 346 aaKnown RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 TAS2R60P59551 318 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TFF2Q03403 129 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 HIST3H3Q16695 136 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 HIKESHIQ53FT3 197 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 IBA57Q5T440 356 aaKnown RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 UNQ5815/PRO19632Q6UWF5 114 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ABHD12Q8N2K0 398 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR2K2Q8NGT1 345 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 GUCD1Q96NT3 240 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 HDHD3Q9BSH5 251 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM106BQ9NUM4 274 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 FLRT3Q9NZU0 649 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 FRRS1LQ9P0K9 344 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 YBX2Q9Y2T7 364 aaKnown RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 A0A1W2PNR3 127 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 GDF9O60383 454 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CD3DP04234 171 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 THBDP07204 575 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ZNF415Q09FC8 603 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SIGLEC15Q6ZMC9 328 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 NEGR1Q7Z3B1 354 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CXorf67Q86X51 503 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM99Q8N816 258 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 LINC01555Q8NAE3 123 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR5AU1Q8NGC0 362 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 NPCDR1Q9BY65 106 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 IDI2-AS1Q9NZ38 188 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 AMY1AP04745 511 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SSTR5P35346 364 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SELENOPP49908 381 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 LSAMPQ13449 338 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SS18Q15532 418 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 INPP5JQ15735 1006 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 ZIC1Q15915 447 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 FAM219BQ5XKK7 198 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM136Q6ZRR5 245 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 PARLQ9H300 379 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 DNAJC4Q9NNZ3 241 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 A0A1W2PQF6 199 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 EFEMP2O95967 443 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 HTR6P50406 440 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TNFRSF9Q07011 255 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 LINC01545Q5VT33 79 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 MAVSQ7Z434 540 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR10G8Q8NGN5 311 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CST9LQ9H4G1 147 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 DUSP21Q9H596 190 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ROS1P08922 2347 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 A0A087WX48 190 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 IGHV3-20A0A0C4DH32 117 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 H3BUA1 57 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 J3QKU1 62 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 FFAR1O14842 300 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 MPC2O95563 127 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 IL4P05112 153 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 RHOGP84095 191 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 COL9A2Q14055 689 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 COX20Q5RI15 118 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 C1orf122Q6ZSJ8 110 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 Q6ZSR9 355 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR1P1Q8NH06 330 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 OR52E5Q8NH55 327 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 PLA2G3Q9NZ20 509 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 KLK5Q9Y337 293 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 CLDN16Q9Y5I7 305 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 PIEZO1Q92508 2521 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ZNF324O75467 553 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 PSG5Q15238 335 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 C2orf83Q53S99 150 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 NHLRC3Q5JS37 347 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 GLRX5Q86SX6 157 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 C10orf126Q8N4M7 172 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 C21orf62Q9NYP8 219 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 FOXA2Q9Y261 457 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 HS3ST3B1Q9Y662 390 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 C9orf170A2RU37 121 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 A8MV72 311 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 CRXO43186 299 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 NUDT3O95989 172 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 TNFRSF1BP20333 461 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 NBL1P41271 181 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 PCP4P48539 62 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 CX3CL1P78423 397 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ACSF3Q4G176 576 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A53Q5H9E4 307 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ACP7Q6ZNF0 438 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM123Q8N131 208 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 ZNF48Q96MX3 618 aaPredicted RBP2.32□□□□□ -2.04
CHD9-202ENST00000398510 TMEM133Q9H2Q1 129 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 COX11Q9Y6N1 276 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 USP34Q70CQ2 3546 aa2.32□□□□□ -2.04
CHD9-202ENST00000398510 SPRY1O43609 319 aaPredicted RBP2.31□□□□□ -2.04
CHD9-202ENST00000398510 SFT2D2O95562 160 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms