RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 FOXB2Q5VYV0 432 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 LINC00299Q6ZSB3 139 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 TMEM56Q96MV1 263 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 TP53RKQ96S44 253 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 RTBDNQ9BSG5 229 aaPredicted RBP11.02□□□□□ -0.65
HDDC2-202ENST00000398153 C5orf66Q9H5L9 145 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 AKIP1Q9NQ31 210 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 NDUFA4L2Q9NRX3 87 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 MCUBQ9NWR8 336 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 THYN1Q9P016 225 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 PEF1Q9UBV8 284 aaKnown RBP11.02□□□□□ -0.65
HDDC2-202ENST00000398153 OR51B2Q9Y5P1 312 aa11.02□□□□□ -0.65
HDDC2-202ENST00000398153 IGHV4OR15-8A0A075B7B6 117 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 A0A087WW49 117 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 CGB1A6NKQ9 187 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 C15orf61A6NNL5 157 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 OVOL1O14753 267 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 IGKV1-39P01597 117 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 IGKV1D-39P04432 117 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 DEFA4P12838 97 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 DHODHQ02127 395 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 ZNF45Q02386 682 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 ZNF429Q86V71 674 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 FAM219AQ8IW50 185 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 OR1L6Q8NGR2 347 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 OR4A16Q8NH70 328 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 LSM10Q969L4 123 aaKnown RBP11.01□□□□□ -0.65
HDDC2-202ENST00000398153 SLC25A21Q9BQT8 299 aaPredicted RBP11.01□□□□□ -0.65
HDDC2-202ENST00000398153 SRRQ9GZT4 340 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 TMEM222Q9H0R3 208 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 ALX4Q9H161 411 aaPredicted RBP11.01□□□□□ -0.65
HDDC2-202ENST00000398153 KCNIP3Q9Y2W7 256 aa11.01□□□□□ -0.65
HDDC2-202ENST00000398153 TEX13DA0A0J9YY54 714 aaPredicted RBP11□□□□□ -0.65
HDDC2-202ENST00000398153 CRYM-AS1A6NIL9 109 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 CDS2O95674 445 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 AREGP15514 252 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 TATDN3Q17R31 274 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 TRIM16LQ309B1 348 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 C15orf32Q32M92 178 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 PDLIM3Q53GG5 364 aaPredicted RBP11□□□□□ -0.65
HDDC2-202ENST00000398153 SGPP2Q8IWX5 399 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 DCUN1D4Q92564 292 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 DLX4Q92988 240 aaPredicted RBP11□□□□□ -0.65
HDDC2-202ENST00000398153 GALNT14Q96FL9 552 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 CXorf58Q96LI9 332 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 NAA60Q9H7X0 242 aa11□□□□□ -0.65
HDDC2-202ENST00000398153 IGLV11-55A0A075B6I3 123 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.99□□□□□ -0.65
HDDC2-202ENST00000398153 NAP1L6A6NFF2 107 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 SEC14L6B5MCN3 397 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 P0C879 139 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 MYOD1P15172 320 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 HOXD3P31249 432 aaPredicted RBP10.99□□□□□ -0.65
HDDC2-202ENST00000398153 AKR1C2P52895 323 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 HSPE1P61604 102 aaKnown RBP10.99□□□□□ -0.65
HDDC2-202ENST00000398153 GLYATL2Q8WU03 294 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 RRNAD1Q96FB5 475 aaKnown RBP10.99□□□□□ -0.65
HDDC2-202ENST00000398153 CACFD1Q9UGQ2 172 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 FBXL7Q9UJT9 491 aa10.99□□□□□ -0.65
HDDC2-202ENST00000398153 TRBV7-1A0A0A6YYK4 115 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
HDDC2-202ENST00000398153 OR2J3O76001 311 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 PRH1P02810 166 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 OR5AC1P0C628 307 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 OR13C7P0DN81 318 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 INPP1P49441 399 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 SLURP1P55000 103 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 WT1-ASQ06250 92 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 EXOSC2Q13868 293 aaKnown RBP10.98□□□□□ -0.65
HDDC2-202ENST00000398153 KLF5Q13887 457 aaPredicted RBP10.98□□□□□ -0.65
HDDC2-202ENST00000398153 ACSM6Q6P461 480 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 RBPMSQ93062 196 aaKnown RBP10.98□□□□□ -0.65
HDDC2-202ENST00000398153 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 ELOVL1Q9BW60 279 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 NSG2Q9Y328 171 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 TMEM56-RWDD3S4R434 201 aa10.98□□□□□ -0.65
HDDC2-202ENST00000398153 ANKRD34BA5PLL1 514 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 INS-IGF2F8WCM5 200 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 IGKV1-5P01602 117 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 ANXA3P12429 323 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 SRPXP78539 464 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 PRCDQ00LT1 54 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 DCTN2Q13561 401 aaKnown RBP10.97□□□□□ -0.65
HDDC2-202ENST00000398153 SP6Q3SY56 376 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 TRIQKQ629K1 86 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 ZNF57Q68EA5 555 aaPredicted RBP10.97□□□□□ -0.65
HDDC2-202ENST00000398153 OR10W1Q8NGF6 305 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 VN1R17PQ8TDU5 208 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 EEF1AKMT3Q96AZ1 226 aa10.97□□□□□ -0.65
HDDC2-202ENST00000398153 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
HDDC2-202ENST00000398153 A6NHS1 94 aa10.96□□□□□ -0.65
HDDC2-202ENST00000398153 CENPXA8MT69 81 aa10.96□□□□□ -0.65
HDDC2-202ENST00000398153 REG1AP05451 166 aa10.96□□□□□ -0.65
HDDC2-202ENST00000398153 ERHP84090 104 aaKnown RBP10.96□□□□□ -0.65
HDDC2-202ENST00000398153 RPEL1Q2QD12 228 aa10.96□□□□□ -0.65
HDDC2-202ENST00000398153 AARDQ4LEZ3 155 aa10.96□□□□□ -0.65
HDDC2-202ENST00000398153 TMEM128Q5BJH2 165 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms