RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SCGB1D2O95969 90 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 THBDP07204 575 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 LOXP28300 417 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF616Q08AN1 781 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 LYRM7Q5U5X0 104 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 Q6ZRM9 215 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 DPM3Q9P2X0 92 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 FAM231BA6NCW3 169 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 J3QR06 171 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 KRASP01116 189 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 NPBWR1P48145 328 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 C17orf58Q2M2W7 97 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MS4A7Q9GZW8 240 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 TECRQ9NZ01 308 aaKnown RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF253O75346 499 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 FOXH1O75593 365 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MT-ND6P03923 174 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 TAS2R60P59551 318 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 CD69Q07108 199 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 FAM27E3Q08E93 113 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MSMPQ1L6U9 139 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 LYPD1Q8N2G4 141 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 QTRT1Q9BXR0 403 aaKnown RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PSG11Q9UQ72 335 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 TRAV30A0A087WSZ9 112 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MAP1LC3B2A6NCE7 125 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 CD80P33681 288 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 EFNA4P52798 201 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRR20EP86478 221 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRR20CP86479 221 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRR20DP86480 221 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRR20BP86481 221 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRR20AP86496 221 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PDE6HQ13956 83 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF672Q499Z4 452 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 KCNIP4Q6PIL6 250 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MYPOPQ86VE0 399 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF295-AS1Q8N0V1 137 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 MAP1LC3BQ9GZQ8 125 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 SMIM6P0DI80 62 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 HIST1H1BP16401 226 aaKnown RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PPP1CCP36873 323 aaKnown RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 DLX6P56179 175 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 SSSCA1O60232 199 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 C16orf82Q7Z2V1 217 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 ANAPC16Q96DE5 110 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PRORYQ9H606 182 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 SPSB3Q6PJ21 355 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 CA5BP1Q8WTZ4 195 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 PACRGQ96M98 296 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-206ENST00000397617 OR1A1Q9P1Q5 309 aa4.81□□□□□ -1.64
PTPRD-206ENST00000397617 BRS3P32247 399 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 LGALS4P56470 323 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 FOXC1Q12948 553 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR4A47Q6IF82 309 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR1L4Q8NGR5 311 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 CRIM1Q9NZV1 1036 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 GNG13Q9P2W3 67 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 PCP4L1A6NKN8 68 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 C15orf62A8K5M9 175 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 DEFB108AA8MXU0 73 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 CXorf1O96002 111 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 CT83Q5H943 113 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 VCX2Q9H322 139 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 TRBV6-1A0A0K0K1D8 114 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR10J4P0C629 311 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 IGHV1-8P0DP01 117 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 SSTR5P35346 364 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 UBE2G2P60604 165 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 RPP25LQ8N5L8 163 aaKnown RBP4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR8B3Q8NGG8 313 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR8B2Q96RD0 313 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 HTR1DP28221 377 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 BRWD1-AS2P59051 145 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 ERVS71-1P61550 626 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 OR10G8Q8NGN5 311 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 HS3ST6Q96QI5 342 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 IL36RNQ9UBH0 155 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 LOC102723971A0A1B0GUV8 181 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 TRGV9Q99603 122 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 HINT2Q9BX68 163 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 NPCDR1Q9BY65 106 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 MAST4O15021 2626 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 A0A1W2PPV4 95 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 CEBPZOSA8MTT3 80 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 NDUFA3O95167 84 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 SRP19P09132 144 aaKnown RBP4.8□□□□□ -1.64
PTPRD-206ENST00000397617 EDDM3BP56851 147 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 UNQ6494/PRO21346Q6UXR6 183 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 WFDC8Q8IUA0 241 aa4.8□□□□□ -1.64
PTPRD-206ENST00000397617 FAM24AA6NFZ4 105 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 CCL21O00585 134 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 WDR25Q64LD2 544 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 RASL11AQ6T310 242 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF826PQ6ZT77 177 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 DMRTC2Q8IXT2 367 aaPredicted RBP4.79□□□□□ -1.64
PTPRD-206ENST00000397617 CLDND2Q8NHS1 167 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 ZNF488Q96MN9 340 aa4.79□□□□□ -1.64
PTPRD-206ENST00000397617 SH2D7A6NKC9 451 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms