RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CCKARP32238 428 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 BRS3P32247 399 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 ATP5G3P48201 142 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 C1orf229Q6ZS94 237 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 NAGKQ9UJ70 344 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 LSM4Q9Y4Z0 139 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 PXMP4Q9Y6I8 212 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 IGLV3-9A0A075B6K5 115 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 IGHV3-7P01780 117 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 CRYAAP02489 173 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 GATA4P43694 442 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 ACTL10Q5JWF8 245 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 ZNF474Q6S9Z5 364 aaPredicted RBP13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 ABHD12Q8N2K0 398 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 FAM222BQ8WU58 562 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 PATZ1Q9HBE1 687 aaKnown RBP13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 BSNQ9UPA5 3926 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 TANC2Q9HCD6 1990 aa13.16□□□□□ -0.3
CCHCR1-202ENST00000396263 K7EM74 188 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 UBE2G2P60604 165 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 CST9LP1Q5W188 147 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 KCNIP4Q6PIL6 250 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 CISD2Q8N5K1 135 aaKnown RBP13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 ITLN1Q8WWA0 313 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 NPVFQ9HCQ7 196 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 LCN2P80188 198 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 BATFQ16520 125 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 TDRG1Q3Y452 100 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 MIC13Q5XKP0 118 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 C1orf159Q96HA4 380 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 FOXA2Q9Y261 457 aaPredicted RBP13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
CCHCR1-202ENST00000396263 KBTBD11-OT1A0A1B0GTJ5 212 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 SPRY3O43610 288 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 NDUFB4O95168 129 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 CXorf1O96002 111 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 ARL14EPLP0DKL9 152 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 CD33P20138 364 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 UTF1Q5T230 341 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 ALKBH2Q6NS38 261 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 ZADH2Q8N4Q0 377 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 SDSLQ96GA7 329 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 IMMP2LQ96T52 175 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 TMEM14BQ9NUH8 114 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 SAA2-SAA4A0A096LPE2 208 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 TCF21O43680 179 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 NUPR1O60356 82 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 SAA2P0DJI9 122 aaPredicted RBP13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 TFPI2P48307 235 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 THBS3P49746 956 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 SPACA3Q8IXA5 215 aa13.14□□□□□ -0.31
CCHCR1-202ENST00000396263 IL6RP08887 468 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 CHRNA7P36544 502 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 OR5I1Q13606 314 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 IGFL3Q6UXB1 125 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 TMEM256Q8N2U0 113 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 TBX15Q96SF7 602 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 DERL1Q9BUN8 251 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 MSRB2Q9Y3D2 182 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 MAP1BP46821 2468 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 ZNF705FA8MVS1 300 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 ZNF705DP0CH99 300 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 ZNF705BP0CI00 300 aaPredicted RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 BMP5P22003 454 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 OR10J1P30954 320 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 HSPE1P61604 102 aaKnown RBP13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 OR4A47Q6IF82 309 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 LEAP2Q969E1 77 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 ADTRPQ96IZ2 230 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 BTF3L4Q96K17 158 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 FAM215AQ9Y5M1 114 aa13.13□□□□□ -0.31
CCHCR1-202ENST00000396263 SIAH2O43255 324 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 NPY1RP25929 384 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 POU2AF1Q16633 256 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 FAM201AQ5SY85 155 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 STUMQ69YW2 141 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 VHLLQ6RSH7 139 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 TMEM144Q7Z5S9 345 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 ZNF439Q8NDP4 499 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 SLC24A4Q8NFF2 622 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 OR5T1Q8NG75 326 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 RNF7Q9UBF6 113 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 TRGV10A0A0A0MS01 117 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 TEPPQ6URK8 271 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 CHODLQ9H9P2 273 aa13.12□□□□□ -0.31
CCHCR1-202ENST00000396263 IL3RAP26951 378 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 CNN1P51911 297 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 FOXL1Q12952 345 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 FAM78BQ5VT40 261 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 LINC00574Q9H8X3 128 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 GCM1Q9NP62 436 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 IDI2-AS1Q9NZ38 188 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 FNDC10F2Z333 226 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 C1QTNF9P0C862 333 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 Q6ZS92 163 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 TCF23Q7RTU1 214 aa13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 RBMXL3Q8N7X1 1067 aaKnown RBP13.11□□□□□ -0.31
CCHCR1-202ENST00000396263 ZNF114Q8NC26 417 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms