RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 TMEM155Q4W5P6 130 aa13.67□□□□□ -0.22
NUP50-202ENST00000396096 C2orf83Q53S99 150 aa13.67□□□□□ -0.22
NUP50-202ENST00000396096 IQCF2Q8IXL9 164 aa13.67□□□□□ -0.22
NUP50-202ENST00000396096 PATZ1Q9HBE1 687 aaKnown RBP13.67□□□□□ -0.22
NUP50-202ENST00000396096 PTPRQQ9UMZ3 2332 aa13.67□□□□□ -0.22
NUP50-202ENST00000396096 TRBV24-1A0A075B6N3 115 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 IGHV1-69-2A0A0G2JMI3 117 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.66□□□□□ -0.22
NUP50-202ENST00000396096 VENTXO95231 258 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 CXorf1O96002 111 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 MEOX2P50222 304 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 B2MP61769 119 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 FABP9Q0Z7S8 132 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 ADIRFQ15847 76 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 OR1L8Q8NGR8 309 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 OR4A5Q8NH83 315 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 ST6GALNAC6Q969X2 333 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 ARFGEF3Q5TH69 2177 aa13.66□□□□□ -0.22
NUP50-202ENST00000396096 FSTL3O95633 263 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PRR20EP86478 221 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PRR20CP86479 221 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PRR20DP86480 221 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PRR20BP86481 221 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PRR20AP86496 221 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PDPNQ86YL7 162 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 FAM210BQ96KR6 192 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 HARBI1Q96MB7 349 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 C12orf57Q99622 126 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 NABP2Q9BQ15 211 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 HINT2Q9BX68 163 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 SPTBN2O15020 2390 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 F6UZH7 168 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 NPPCP23582 126 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 KIAA0141Q14154 515 aaPredicted RBP13.65□□□□□ -0.22
NUP50-202ENST00000396096 SPNS3Q6ZMD2 512 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 STPG3Q8N7X2 389 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 TMEM167AQ8TBQ9 72 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 SSX3Q99909 188 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PCGF1Q9BSM1 259 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 NBEAQ8NFP9 2946 aa13.65□□□□□ -0.22
NUP50-202ENST00000396096 PIEZO2Q9H5I5 2752 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 TRBV23-1A0A0A0MS06 115 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 ARL14EPLP0DKL9 152 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 RNASE2P10153 161 aaKnown RBP13.64□□□□□ -0.23
NUP50-202ENST00000396096 USF1P22415 310 aaPredicted RBP13.64□□□□□ -0.23
NUP50-202ENST00000396096 RHOBP62745 196 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 TMEM144Q7Z5S9 345 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 OR10X1Q8NGY0 326 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 OR9G1Q8NH87 305 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 ABHD5Q8WTS1 349 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 SSMEM1Q8WWF3 244 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 FLYWCH2Q96CP2 140 aaKnown RBP13.64□□□□□ -0.23
NUP50-202ENST00000396096 NDUFA4L2Q9NRX3 87 aa13.64□□□□□ -0.23
NUP50-202ENST00000396096 C16orf82Q7Z2V1 217 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 OR4C13Q8NGP0 309 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 VSTM2AQ8TAG5 236 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 NANPQ8TBE9 248 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 ANAPC16Q96DE5 110 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 PYGO2Q9BRQ0 406 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 TCEAL7Q9BRU2 100 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 DOK5Q9P104 306 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 SLC45A2Q9UMX9 530 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 PFN1P07737 140 aaKnown RBP13.63□□□□□ -0.23
NUP50-202ENST00000396096 LINC00869P0C866 280 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 IGFBP2P18065 325 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 CHRNB4P30926 498 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 GNB1P62873 340 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 RPL8P62917 257 aaKnown RBP13.63□□□□□ -0.23
NUP50-202ENST00000396096 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 ATMQ13315 3056 aa13.63□□□□□ -0.23
NUP50-202ENST00000396096 TNCP24821 2201 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 ROS1P08922 2347 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 PLAUP00749 431 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 SMIM6P0DI80 62 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 IGHV1-8P0DP01 117 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 ATP5G3P48201 142 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 C11orf42Q8N5U0 333 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 COMMD5Q9GZQ3 224 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 WASHC3Q9Y3C0 194 aa13.62□□□□□ -0.23
NUP50-202ENST00000396096 IGLV2-23P01705 113 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 HOXA5P20719 270 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 GCHFRP30047 84 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 KLRB1Q12918 225 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 CST9LP1Q5W188 147 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 LINC01560Q8TB33 94 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 TNFRSF14Q92956 283 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 SLC35E1Q96K37 410 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 CEP295Q9C0D2 2601 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 A0A1W2PN81 502 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 H7BYZ3 331 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 CLN5O75503 358 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 MC5RP33032 325 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 CHRNA7P36544 502 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 REG1BP48304 166 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 UBE2G2P60604 165 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 DIAPH2-AS1Q14236 149 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 PNKDQ8N490 385 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 CACNG8Q8WXS5 425 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 TMEM133Q9H2Q1 129 aa13.61□□□□□ -0.23
NUP50-202ENST00000396096 SEPSECSQ9HD40 501 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms