RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 B4GALT7Q9UBV7 327 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 RNF24Q9Y225 148 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 KMT2EQ8IZD2 1858 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 CD24P25063 80 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 ZNF83P51522 516 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 ZNF146Q15072 292 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 RNASE8Q8TDE3 154 aaKnown RBP11.84□□□□□ -0.51
CLIP2-203ENST00000395060 LINC00470Q9BZP3 86 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 TET2Q6N021 2002 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-203ENST00000395060 A0A1W2PS18 150 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 HELTA6NFD8 242 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 C3orf79P0CE67 100 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 CNEP1R1Q8N9A8 125 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 FAM173AQ9BQD7 235 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 SSBP4Q9BWG4 385 aaPredicted RBP11.84□□□□□ -0.51
CLIP2-203ENST00000395060 CLCF1Q9UBD9 225 aa11.84□□□□□ -0.51
CLIP2-203ENST00000395060 HYPMO75409 117 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 PMCHL1Q16048 86 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 FAM201AQ5SY85 155 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 FAM168AQ92567 244 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 PLEKHA3Q9HB20 300 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 TNRC6AQ8NDV7 1962 aaKnown RBP11.83□□□□□ -0.52
CLIP2-203ENST00000395060 C20orf202A1L168 122 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 H0Y8G0 127 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 TIMM8AO60220 97 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-203ENST00000395060 NDUFB8O95169 186 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 ERVK-16P61578 105 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 ATP1A1-AS1Q5TC04 95 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 ETFRF1Q6IPR1 90 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 KLF14Q8TD94 323 aaPredicted RBP11.83□□□□□ -0.52
CLIP2-203ENST00000395060 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 V9GYV3 84 aa11.83□□□□□ -0.52
CLIP2-203ENST00000395060 LOC102724200A0A096LPH7 203 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 LNP1A1A4G5 178 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 CCL25O15444 150 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 CAMPP49913 170 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 SELENOTP62341 195 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 RELBQ01201 579 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 VWC2Q2TAL6 325 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 ZNF718Q3SXZ3 478 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 ZNRF1Q8ND25 227 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 C1orf159Q96HA4 380 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 ZNRD1Q9P1U0 126 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 A0A1W2PN81 502 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 GFRA3O60609 400 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 WISP2O76076 250 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 DUTP33316 252 aaKnown RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 OPRK1P41145 380 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 Q8IYB0 196 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 RPH3ALQ9UNE2 315 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 TCF19Q9Y242 345 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 LAMTOR2Q9Y2Q5 125 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 POLEQ07864 2286 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 RIF1Q5UIP0 2472 aaKnown RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 M0QZ24 198 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 ZNF134P52741 427 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 BCL2L2Q92843 193 aaPredicted RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 MCRIP2Q9BUT9 160 aaKnown RBP11.82□□□□□ -0.52
CLIP2-203ENST00000395060 DUSP13Q9UII6 198 aa11.82□□□□□ -0.52
CLIP2-203ENST00000395060 DPRXA6NFQ7 191 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 SPINT2O43291 252 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 NRN1LQ496H8 165 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 FBXW9Q5XUX1 488 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 C1orf174Q8IYL3 243 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 Q8N976 141 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 PLXNB1O43157 2135 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 ATMQ13315 3056 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 CA2P00918 260 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 RHOBP62745 196 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 EIF4EBP1Q13541 118 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-203ENST00000395060 TRIP6Q15654 476 aaKnown RBP11.81□□□□□ -0.52
CLIP2-203ENST00000395060 TEPPQ6URK8 271 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 GMPPAQ96IJ6 420 aaPredicted RBP11.81□□□□□ -0.52
CLIP2-203ENST00000395060 RNF2Q99496 336 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 DMXL1Q9Y485 3027 aa11.81□□□□□ -0.52
CLIP2-203ENST00000395060 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
CLIP2-203ENST00000395060 TRAV5A0A0B4J249 113 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 SH2D7A6NKC9 451 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-203ENST00000395060 C9orf172C9J069 976 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 MEOX1P50221 254 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 DHRS13Q6UX07 377 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 BORCS7Q96B45 105 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 S1PR3Q99500 378 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 A0A1W2PNU3 283 aaPredicted RBP11.8□□□□□ -0.52
CLIP2-203ENST00000395060 BMPR1BO00238 502 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 PLAUP00749 431 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 SLAQ13239 276 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
CLIP2-203ENST00000395060 OR4B1Q8NGF8 309 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 LRRC29Q8WV35 223 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 ZNF355PQ9NSJ1 428 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 IGLC2P0DOY2 106 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 IGLC3P0DOY3 106 aa11.8□□□□□ -0.52
CLIP2-203ENST00000395060 MRPL49Q13405 166 aaKnown RBP11.8□□□□□ -0.52
CLIP2-203ENST00000395060 SSPNQ14714 243 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms