RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MT-CO3P00414 261 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 CT62P0C5K7 136 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 CX3CL1P78423 397 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 GAB4Q2WGN9 574 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 GCSAMLQ5JQS6 135 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 C1QL2Q7Z5L3 287 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZDHHC23Q8IYP9 409 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 BCL6BQ8N143 479 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-201ENST00000393077 SPEM1Q8N4L4 309 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZADH2Q8N4Q0 377 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 OR13C6PQ8NH95 151 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF501Q96CX3 271 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-201ENST00000393077 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 LYRM4Q9HD34 91 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 AP5S1Q9NUS5 200 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 IZUMO1RA6ND01 250 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 NPIPB5A8MRT5 1133 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 CDAP32320 146 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF816Q0VGE8 651 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZIC1Q15915 447 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 OR5AN1Q8NGI8 311 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF391Q9UJN7 358 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 INSIG2Q9Y5U4 225 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 IGLV1-36A0A0B4J1U3 117 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 IGHV3-20A0A0C4DH32 117 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 A0A1W2PQM1 296 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 PSG4Q00888 419 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 OR8B8Q15620 311 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 TMEM211Q6ICI0 200 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 VN1R4Q7Z5H5 301 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 OR5AS1Q8N127 324 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 OR4F17Q8NGA8 305 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 C16orf52Q8NHV5 167 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 RDH5Q92781 318 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 TRBV20-1A0A075B6N2 111 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 SAA2-SAA4A0A096LPE2 208 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 A0A1W2PPV9 198 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 WIPF3A6NGB9 483 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF716A6NP11 495 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 H0YJW9 148 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 M0R135 149 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 IL4P05112 153 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 DEFA4P12838 97 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 SSBP2P81877 361 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-201ENST00000393077 PIGYQ3MUY2 71 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF818PQ6ZRF7 136 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.44□□□□□ -1.38
VTI1A-201ENST00000393077 RAB1CQ92928 201 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF799Q96GE5 643 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 SFXN3Q9BWM7 321 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 NPCDR1Q9BY65 106 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 FAM60AQ9NP50 221 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF355PQ9NSJ1 428 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 ALKBH4Q9NXW9 302 aa6.44□□□□□ -1.38
VTI1A-201ENST00000393077 TMSB15BA0A087X1C1 80 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 TRAV8-2A0A0B4J237 113 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 IGHV1OR15-9A0A0B4J2B8 117 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 A8MWL6 223 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 COX8AP10176 69 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 MFAP4P55083 255 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 ARG2P78540 354 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 WFDC2Q14508 124 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 C5orf47Q569G3 176 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 EBLN2Q6P2I7 272 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 C10orf126Q8N4M7 172 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 ZBTB34Q8NCN2 500 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 FAM110AQ9BQ89 295 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 NDFIP1Q9BT67 221 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 RAB1BQ9H0U4 201 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 IL36RNQ9UBH0 155 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 JPT1Q9UK76 154 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 DOCK4Q8N1I0 1966 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 LOC102723996A0A087X1L8 192 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 CRYGCP07315 174 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 SRD5A2P31213 254 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 LTBRP36941 435 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 KIR2DL2P43627 348 aaPredicted RBP6.43□□□□□ -1.38
VTI1A-201ENST00000393077 QRFPP83859 136 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 NEGR1Q7Z3B1 354 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 CDX2Q99626 313 aaPredicted RBP6.43□□□□□ -1.38
VTI1A-201ENST00000393077 RABAC1Q9UI14 185 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 H3BMG7 143 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 SCRG1O75711 98 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 TMEM50AO95807 157 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 CA6P23280 308 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 SPATA31B1PQ5VZV4 182 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 CA13Q8N1Q1 262 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 ZNF114Q8NC26 417 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 SGK494Q96LW2 274 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 OSTCQ9NRP0 149 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 TNFRSF19Q9NS68 423 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 ERG28Q9UKR5 140 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 SVILO95425 2214 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 DYSFO75923 2080 aa6.43□□□□□ -1.38
VTI1A-201ENST00000393077 PATJQ8NI35 1801 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 MED12LQ86YW9 2145 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 hADV38S2A0JD32 116 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 LMO7DNF2Z398 122 aa6.42□□□□□ -1.38
VTI1A-201ENST00000393077 PGLYRP1O75594 196 aaPredicted RBP6.42□□□□□ -1.38
VTI1A-201ENST00000393077 TFF3Q07654 80 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms